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Domain assignment for gi|219852661|ref|YP_002467093.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|219852661|ref|YP_002467093.1|
Domain Number 1 Region: 1238-1379
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 9.21e-30
Family Family 6 carbohydrate binding module, CBM6 0.001
Further Details:      
 
Domain Number 2 Region: 738-824
Classification Level Classification E-value
Superfamily PKD domain 2.88e-29
Family PKD domain 0.00029
Further Details:      
 
Domain Number 3 Region: 864-951
Classification Level Classification E-value
Superfamily PKD domain 2.35e-22
Family PKD domain 0.00066
Further Details:      
 
Domain Number 4 Region: 952-1072
Classification Level Classification E-value
Superfamily PKD domain 7.85e-16
Family PKD domain 0.00095
Further Details:      
 
Domain Number 5 Region: 1127-1207
Classification Level Classification E-value
Superfamily PKD domain 0.000000000034
Family PKD domain 0.0018
Further Details:      
 
Domain Number 6 Region: 209-258
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000000288
Family Carboxypeptidase regulatory domain 0.031
Further Details:      
 
Domain Number 7 Region: 121-172
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000000392
Family Carboxypeptidase regulatory domain 0.021
Further Details:      
 
Domain Number 8 Region: 297-346
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000000484
Family Carboxypeptidase regulatory domain 0.021
Further Details:      
 
Domain Number 9 Region: 385-429
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.000000105
Family Carboxypeptidase regulatory domain 0.019
Further Details:      
 
Domain Number 10 Region: 34-84
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.000000562
Family Carboxypeptidase regulatory domain 0.023
Further Details:      
 
Domain Number 11 Region: 561-638
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.00000667
Family Pre-dockerin domain 0.052
Further Details:      
 
Domain Number 12 Region: 471-514
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000824
Family Carboxypeptidase regulatory domain 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|219852661|ref|YP_002467093.1|
Sequence length 1380
Comment carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Sequence
MANLLKRMTWLLIGVFIVSCLLMITPVAAKSVSLTGIVTDSITGLPVSGATITVHGTGVT
TNSVSSGSDGHYSLVFSVSSYIYAALCDIHKDGYVESNNNPIAFLGSSTSKDYKLAPVLR
TLTGTVTDSITGQPVSNATISVHGYETTSNNTQSDSDGHYSVDFQTSGSLAVPFCDIHKD
GYVENNNNLISLSGSVISKDYRLTPVLRTLTGTVTDSITGQPVSNATISVHGYETTSNNT
LSDSDGYYSLDFQTSGSLAVPLCDIHKDGYVENNNNLISLSGSVISKDYRLTPVLRTLTG
TVTDSITGQPVSNATISVHGYETTSNNTQSDSDGHYSVDFQTSGSLAVPLCDIHKDGYVE
NNNNLISLSGSVISKDYKLTPVLRTLTGTVTDSQSGQPVSNATISIHGYKTTSNNTSSDS
DGHYSLDFQTSDSLAVPLCDIHKNGYVENNNNLISLSGSVISKDFQLTLTQTLNGTVVDR
FTGLPVSNAKILINGNQVTSTGNGSFTLSNVTPTVVDINGNALNVLASNTYWSHSSLFSY
SSAELQRGSKDLGTIELTPYLAGYVTNSANQPVSGAHITLTVHSLVVTSGSATSDNSGYY
LSQLEIPDGLVLTNISSVNLTVMKDGYLPYSTELGASDFLNPSLHNITFTPIALNNCTPD
HAETNNTSVSFTLTTSGIISPQEVRLVKAGQTNITAGSVAMTPDRNAITGTFNLRNAALG
DWGIVVVNGDGAEVKWAGTFTILQQLVANFTANTTAGNRQLPVQFTDLSTGSPISWLWEF
GDGNSSMEQSPVHIYTDAGNYTVNLTATNAGGSNTTAKTNYITVRAPVPPTTAPTTTAPT
TAPATTVPTRIPTTIPTTIPVTPTPTATVPPLVANFSANVTAGQTPLAVQFTDATTGLVR
QYFWQFGDGGASFDKNPVHTYSAAGKYTISLFVIDQNGWQVKTNEQYITVTAPGTPTVSP
TVTTTVTATTPAPTTTTTITPIVTKTIPVTPTVAPLPIANFVVTYQSGAGSMGIQVTDAS
TNATVVKYDLGDGTTTAYKNFKYTYWQPGTYTVKLIATNDAGSSTKTVTVTVPAGSPTTT
TVSPTVTVTTPAPTMTTVSPTTTMTTPVTPTVTSTFTPTPTPTIPNLPVANFTVTFPGGI
GSMGIQITNTAVNATSVHYNLGDGATTAYPNFTYSYWQPGNYTINQTATNAAGSSNKTIM
VTVPVGSIPTTIPPTIPTTTVSPTVTVTGSAFDGLHTIPGTLQAEDYDLGGEGVAYHDTT
PGNEGGVYRHDDVDIEQLDTDGSPNVGWIRAGEWLGYTVNVSTAGTYTAGFRVASSHTGS
SVQMYVDDGTTPVATVSVPNTGDWPVFQTVQVPVTLPAGTHRLKFSFPTDFVNINWISFA
Download sequence
Identical sequences B8GDL9
WP_012618689.1.75456 521011.Mpal_2071 gi|219852661|ref|YP_002467093.1|

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