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Domain assignment for gi|219852726|ref|YP_002467158.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|219852726|ref|YP_002467158.1|
Domain Number 1 Region: 825-968
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.56e-24
Family Family 6 carbohydrate binding module, CBM6 0.0014
Further Details:      
 
Domain Number 2 Region: 648-791
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 4.73e-21
Family Family 6 carbohydrate binding module, CBM6 0.0029
Further Details:      
 
Domain Number 3 Region: 9-291
Classification Level Classification E-value
Superfamily Pectin lyase-like 5.5e-19
Family Pectin methylesterase 0.071
Further Details:      
 
Domain Number 4 Region: 507-615
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 6.38e-19
Family Family 6 carbohydrate binding module, CBM6 0.0017
Further Details:      
 
Domain Number 5 Region: 1120-1262
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0000000000000709
Family Family 6 carbohydrate binding module, CBM6 0.015
Further Details:      
 
Domain Number 6 Region: 227-455
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000000271
Family Galacturonase 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|219852726|ref|YP_002467158.1|
Sequence length 1262
Comment carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Sequence
MNIRSKKRIFLIILSLFCLIQAAAATTIVAASDSSASSKASAQYVCDGSGDQSQINAALA
SGGTVQLTEGTFHTDGTILTTGNSVLKGQGPNKTIISMSGDYDARIDIAHDYTTVQDLQI
TTRGWLMIQASHIKVHNVVIQNSKKTAPTVNGMFFVWANGRVCEDIEFVDCQAIDVGSTG
FNVNGMNSPRTTKNIRFVNCLALRCGNSGSGKIWAVGFDFHEGADLYDLQVTNCRAEDNW
ESGFYFEPNFVSGDDPNMDLPVQKNSVLTNCVSVNNGWRNTDPTRFYLSGYYLSCGVTLN
NCVAINNRNNGFWVWQSAQDVILNNCSDDGSNYAFQFRTGTNIQLNNCVSKNARTYGIYA
WGSDGVVVKNFKLINPKQSTGSISLGLREDHPNDPWPVTDCTFEIYVSGVDPAKVITYHN
CANNQISINGYIATDPTTTITPDPTSNPTTTTIVTIPLPGQTVTQIPTPVAFGTSVIPGT
ILAADYNTGGEGVGYHDTTSGNQGGAYRSDDVDLEYSTGTDGPVVGYMRPGEWLAYTVTV
GTAGVYDATFKVSSATDGNSFTVTMDDIPITTVVVPNTGSFDTYTTVKMPVYVLAGTHQM
KVTTTGYHNLATMVFTTHTDTPLPTTTVTTVATTTVATTATSPPSTHGGTNIPGTILAEN
YDDGGEGVAYHDTTPGNQGGQYRSDDVDIEYSAAEGTNVLSYVRPGEWIRYTANVAAAGV
FDVSFRVSTPKSGTSFVVQVDGMDACMVNVPNTGSFDTYTTVVQQISLPAGLHQIRINFN
GYDNLEFMRFQPSGGAATTTTTATQTTTPISTSTLLPVPIPKSYGNGVIPGVIEAEDYNN
GGEGVGYYDTTPGNTGGQYRNDDVDIEYSNGENSPVVSYIRAGEWLKYTVNVQSTTLYDV
LFRVSSPQSGTTMNLQVDGSSVCQVVVPNTGSYDTYTTVTKQVSLAAGPHVLKLMAGGYQ
NLNWIQFKTHGLTQGAALLEVTANQTVVEPTSLPTVAEAVPMVTTGQPAQVETTTQANLT
TPSVTMVQTVAMPTTSAPVETQTQISVSTPLPVITQSAPVQNVTTVQTAATTAAAITTVQ
TTAVPTTVAVNTTVIQTVTPVATVTDAPAPAGAPTYVPQPAGYTLPGRIEAENFKDGGEG
IGYHMNTLNSTGGQYRNDLVPVHYSTVEKGYLVNNLTKDTWLAYAVNAPVAGNYTVALQA
SSQEKTRVLVQLDGADLCTLEVPGTQTCALTQTQKPVAIPAGTHTLTLKPLGTMTLDYLQ
FS
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Identical sequences B8GDT4
521011.Mpal_2137 WP_012618754.1.75456 gi|219852726|ref|YP_002467158.1|

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