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Domain assignment for gi|219852796|ref|YP_002467228.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|219852796|ref|YP_002467228.1|
Domain Number 1 Region: 561-704
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.87e-20
Family Family 6 carbohydrate binding module, CBM6 0.0025
Further Details:      
 
Domain Number 2 Region: 66-341
Classification Level Classification E-value
Superfamily Fucose-specific lectin 0.000000000000262
Family Fucose-specific lectin 0.01
Further Details:      
 
Domain Number 3 Region: 451-546
Classification Level Classification E-value
Superfamily PKD domain 0.00000000000249
Family PKD domain 0.0026
Further Details:      
 
Domain Number 4 Region: 399-454
Classification Level Classification E-value
Superfamily Type I dockerin domain 0.00000000157
Family Type I dockerin domain 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|219852796|ref|YP_002467228.1|
Sequence length 739
Comment carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Sequence
MRRPSFLSCWPPIFSPKVIVTVNRHIFLSILSAALLLVSLGIGPVSAQTWQNETVDSAGQ
VGFFTSLALDSAGNPRISYFDDTDGNLKYAWHDGLGWHNETVDSEGRVGWYTSLALDSAG
NPRISYSDWSNNDLKYAWHDDSGWHTETVDSEGYVGAYTSLALDSAGNPRISYSDLSNND
LKYAWHDDSGWHNETVDSKGTVGWYTSLALDSAGNPRISYLYEGTDDLKYAWHDGSGWHN
ETVDSEGYVGKCTSLALDGAGNPRISYFDNTNNDLKYAWHNDSGWHTETVDSAEWVGWYT
SLALDSNGNPRISYFDDTNDDLKYAYYDSAGWHTETVDSAGEVGLYTSLALDGAGNPRIS
YLDFTHGDLKYAWVGTPLSGVCIVPGGTALPADTDGDGLYDDVNGDGVFNFADVALYFNQ
MEWISDNEPVAAFDYNGNGRVDFGDVIWLFNYLDAPIVSPTPTSTVAAFTLNKTMGAAPL
AVQFTSSDQCDLLNWTIQLGKTPIETRSGMNLTYVFSTAGTYTVQLKASNSTTGVISSAE
NTVTVTGTSTITTEQPYPTQHNVPGRVEAEDYDQGGEGIGYSDTTTPNEGGVYRTDSVDI
ESLPGASGYDVGWIRAGEFLTYSVDTTEAGTFDIGFCVANPGSTKTVIVYVNGAPRTLTI
PATGSWITWQTATLTGVSMNAGRNLIKVDMDNAASFNFDYMEFVVDYIASPTTTTPTPTD
TTLTPTQSPTDTTPTPILT
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Identical sequences B8GE04
gi|219852796|ref|YP_002467228.1| WP_012618824.1.75456 521011.Mpal_2209

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