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Domain assignment for gi|219852940|ref|YP_002467372.1| from Methanosphaerula palustris E1-9c

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|219852940|ref|YP_002467372.1|
Domain Number 1 Region: 439-543
Classification Level Classification E-value
Superfamily PKD domain 7.46e-25
Family PKD domain 0.00033
Further Details:      
 
Domain Number 2 Region: 625-710
Classification Level Classification E-value
Superfamily PKD domain 1.57e-22
Family PKD domain 0.00051
Further Details:      
 
Domain Number 3 Region: 706-785
Classification Level Classification E-value
Superfamily PKD domain 8.89e-22
Family PKD domain 0.001
Further Details:      
 
Domain Number 4 Region: 45-376
Classification Level Classification E-value
Superfamily Pectin lyase-like 6.44e-19
Family Galacturonase 0.064
Further Details:      
 
Domain Number 5 Region: 547-628
Classification Level Classification E-value
Superfamily PKD domain 1.31e-18
Family PKD domain 0.0011
Further Details:      
 
Domain Number 6 Region: 815-869
Classification Level Classification E-value
Superfamily Type I dockerin domain 0.0000000108
Family Type I dockerin domain 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|219852940|ref|YP_002467372.1|
Sequence length 869
Comment PKD domain-containing protein [Methanosphaerula palustris E1-9c]
Sequence
MKQISINPVKNHGIRSVGLILMLLLLVQGAAAASVLVAASDSSASARSAADYRCDGSSDQ
VQINQALDRLAGSGGVVNLAAGTFHCDNFIYVPGAITLTGQGEGGTTIEMINSGETDLPI
TVNSPEVSLSSFTLRGTGYIKITTSQVTVTDVAATNIGTNGHRYPAGGNGMFFIWADGTH
NIEDVSFINCRAVDCNTHGFNLNAKGTAPKETRNIRFINCQATRCGFGAESRDTDITGFD
LQEENDVYDIQLIGCIADDNWESGFHFEPGEDETPPTVKQGIVIRDCISRNNGQRNTLTY
PYHTFMSGFFVSRNAVLTNCKAINNRNAGFFVQGGRNIIFNDCTDDGSSYGWKIVKWSSG
VTLNDCTASDNKIWALWSAFADHITLNRFVQDNAGGLYGTQSMLGWYYGEPAYEQPVNDS
YFDITAYGNHALPIINFNGTGNIYYLRWGDWPGQNGTAPPPTSPAQPNASFIASPSTGFA
PLAVQFTDTTTGVPTDWYWDFGDGTTSSEQNPSHTYTQDGLWTVTLHVGNALGDASTQQT
VAIGTNPHAGFTTTDRRVIDAGGTIHFTDTSTGHPNSWLWDFGDLTTSTDENPIHRFLTA
GIFMVKLIATYGAGTDTEVKSSYITVYPVAQMGVDVSDGAAPMTVHFTDRSYGSPSSRLW
DFGDGSTSIEQNPVHIYPYGGTYTVTLTVEGINGGPIDRATATLSVTGAPSASFTATPAG
TTPPVTVTFLDRSIGQIDSRFWSFGDGTTSTEQSPVHTYSNAGTYNATLTTSNRWGSSST
TLQVNAGDPPYSPIQGVIALPGQSALPTDPNRERLYKDLNGDGAINFNDVVLYFNEMDWI
SDNEPVSAFDFNKNGKIDFDDIVFLFNLL
Download sequence
Identical sequences B8GEE8
WP_012618968.1.75456 521011.Mpal_2368 gi|219852940|ref|YP_002467372.1|

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