SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|219852656|ref|YP_002467088.1| from Methanosphaerula palustris E1-9c

(show help)
Strong hits

Sequence:	gi\|219852656\|ref\|YP_002467088.1\|
Domain Number 1	Region: 728-870
Classification Level	Classification	E-value
Superfamily	Galactose-binding domain-like	7.41e-32
Family	Family 6 carbohydrate binding module, CBM6	0.0018
Further Details:

Domain Number 2	Region: 341-427
Classification Level	Classification	E-value
Superfamily	PKD domain	3.4e-25
Family	PKD domain	0.00049
Further Details:

Domain Number 3	Region: 425-510
Classification Level	Classification	E-value
Superfamily	PKD domain	1.7e-23
Family	PKD domain	0.00052
Further Details:

Domain Number 4	Region: 517-591
Classification Level	Classification	E-value
Superfamily	PKD domain	1.16e-18
Family	PKD domain	0.0014
Further Details:

Domain Number 5	Region: 608-696
Classification Level	Classification	E-value
Superfamily	PKD domain	0.0000000000000706
Family	PKD domain	0.0029
Further Details:

Domain Number 6	Region: 68-222
Classification Level	Classification	E-value
Superfamily	YWTD domain	0.00000000000209
Family	YWTD domain	0.017
Further Details:

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Biological Process	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

Molecular Function	IC (bits)	H-Score

External link(s)	gi\|219852656\|ref\|YP_002467088.1\|
Sequence length	870
Comment	carbohydrate binding family 6 [Methanosphaerula palustris E1-9c]
Sequence	MKVITGLMGGVLLVFALVAVCCTPVSASSLFVGAPSPTMDVPNTVNEFSVSGSTAQYQQN LTISRSNSFFNIKGMAVDASNRTLFVTNNRYHPTGYNITVINATTMQPVTNLSLSATFRA GKCVFDQGHDRLYVYDTNGGDLVGYTWDSDNLTLTPDGMSIPLSEGCNGLDIDPDEYLLY VITYNGTIQKYSSASGVFLGNVSLPVDTGAYSLAVDDVTHCLYMETVSSDQCTYSLLRLD PYGILPTRSIVYQHLDQYSYHSDLFLKLAVDPASHYLYAGTTRKVSDDDDPLMIPELRIY DSDLNLQNTIPVGPPDITATRDDHLLVPGYLAILSDGIVPPTPTPTSAITANFYAFGHVG QAPYSVRFLDQSTGSPTAWKWDFGDNTTSTEQNPTHVYNRTGAYNVALTASNDQASDTCT QYRCVIVNAVPAANFTANTTAGKTPLTVQFIDQSTSGADGYQWQFGDGTTSTEQNPVHTY TTPGSYSVMLTVSEPDYGSVFVQKPGYITVGDPSTIGFSANVTAGLSPLAVQFNESVNGS VQYSFWHFGDGSTSMDSNPVHVYDTPGQYTVSLMTVGSNGTETKTVEDYINVTNPVTPAP TTPAPVNTTVIPTPTEQNLPVANFTVTAGAPGSLAIQVIDTSVNATSVSYDLGDGTTTSY PTFRYTYWQAGTYTIEQTATNAVGSSHKTLTVTVPAAAPTTTPTVTPTTTTTVSPTVTGN PYNGPHTIPGTLQAEDYDLGGEGVAYHDTTPGNEGGVYRHDDVDIEQLDTDGSPNVGWIR AGEWLGYTVNVSTAGTYNAGFRVASSHSGSSIQVYVDNGTTPVATVNVPNTGDWPVFRTV SVPVTLPAGQHRLRLSFPTDYVNINWITFV
Download sequence
Identical sequences	B8GDL4 gi\|219852656\|ref\|YP_002467088.1\| 521011.Mpal_2066

SEARCH