SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000020208 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000020208
Domain Number 1 Region: 208-267
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.23e-20
Family Classic zinc finger, C2H2 0.0091
Further Details:      
 
Domain Number 2 Region: 298-357
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.9e-19
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 3 Region: 167-222
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000187
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 4 Region: 257-291
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000702
Family Classic zinc finger, C2H2 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000020208   Gene: ENSDARG00000013279   Transcript: ENSDART00000017305
Sequence length 516
Comment pep:known_by_projection chromosome:Zv9:22:696335:712516:1 gene:ENSDARG00000013279 transcript:ENSDART00000017305 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEGLGLQAVALSDGSTAFIQQSISDGSLVEGNTIQLEDGTTAYIQHVSVQQKESLAFEDG
QAVQLEDGTTAFIHHTPKEGFDPGAVEAVQLEDGSTAYIHHQPGGAVEMSADTIATLENY
ASKLTGSEVEADDNMENANGAEQTSIQLMFEGKVWSSSKVQQVTDRSFRCEHPGCGRYYT
TAHHLKVHERSHTGDRPYRCEVHSCGKAFATGYGLKSHQRTHTGEKPYKCPEDMCYKAFK
TSGDLQKHVRTHTGEKPFKCPFEGCGRSFTTSNIRKVHTRTHTGERPYLCPEPSCGRAFA
SATNYKNHMRIHTGEKPYLCTVPGCGKSFTEYSSLYKHHVVHTHCKPYTCSHCGKTYRQT
STLAMHKRTAHGDFDTTEDDAEVLDGSPQDVGHSEPDADIAMETNDIISSHLQVLGTAVT
MVTQDGSTISVPAQQSHSGGQQVTMLTDGKELQPVAIVTSDGIMTEVNSSAYQQVALLAT
ENGTQIAVQLEDQQTLEEAITMATAAIQHSGLTSDQ
Download sequence
Identical sequences Q05AL8
ENSDARP00000020208 ENSDARP00000020208 NP_001071078.1.45394 XP_009294035.1.45394 7955.ENSDARP00000020208

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]