SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000084452 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000084452
Domain Number 1 Region: 1007-1059
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000233
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 2 Region: 257-308
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000506
Family Classic zinc finger, C2H2 0.0067
Further Details:      
 
Domain Number 3 Region: 974-1022
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000353
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 4 Region: 191-243
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000566
Family Classic zinc finger, C2H2 0.024
Further Details:      
 
Domain Number 5 Region: 633-677
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00000727
Family Homeodomain 0.011
Further Details:      
 
Weak hits

Sequence:  ENSDARP00000084452
Domain Number - Region: 547-580
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.052
Family Classic zinc finger, C2H2 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000084452   Gene: ENSDARG00000078416   Transcript: ENSDART00000090019
Sequence length 1194
Comment pep:known chromosome:Zv9:6:912352:956982:-1 gene:ENSDARG00000078416 transcript:ENSDART00000090019 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TVLDFENVVETGSETEEEDRLLVSEEDALLNGAGSPASLVNHESEAPPSPTLSHTLLRKT
VDDEDDMKDSGIENVWHENDLLNASIDGTDELKADYDTMGTDVSLEPIGNGTVKSVHCDT
DFEDFFGKRKLVDTESHVVSIAEYLQRGDTAIIYPEAPEELSRSRLATPEATGHEENDLP
PGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFACPLCSYTFAYRTQLERHM
ATHKPGRDQHQILNQGSGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFS
HSGSYSSHISSKKCIGLIAINGRVRNNLKTGSSPTSASSSPTNNAISQLRHKLENGKPLG
LQDQSNHLNIKSEPLDFNDYKLMMASHGYATGSPFLNGGVRGGSPLGIHNSQSPLQHLGM
GIEGQMLGYPSLGNNLSEVQKVLQIVDNTVCRQKMDCKPEEISKLKAYMKELGSHIEEQK
QGLNSSGGGQGTLPLINHNGATKSIIDYTLEKVNEAKACLQSLTTDSKRQISNIKKEKAN
HMLDLGMEEKAHENNLMFTPFSCQYCKETFPGPIPLHQHERYLCKMNEEIKAVLQPAQNA
LTNKPGLFSEKHGLLHPSIIPEKSLNGPISPYKDHMSVLKAYFAMNMEPNSEELLKISIA
VGLPQEFVKEWFEQRKVFQYTTSRTPPLDRSPVESIHPVSAHTPTKDSLGIRSPMSLVKG
SDRITSPAIPELHNNCDTPLRLSKTPQYSNHKQLGDKMDHSRSNTPSPLNLSSASSKNSH
TSSYTPNSFTSEDLQAEPLDLSLPKLMKEPKHILTVKSRLKLNSGPMDHNHVATPREHAD
EPLNLAYLSKKEFGSPNANSNLDKSSSPMFGLNPFAAKPMYTSLPPQSAFPPPTFMPPVQ
ASLPGLRPYPSLDQISFLPHMAYTYAAGAASFAEMQQRRKYQRKPGFQSELLDGPADYLS
SLDDMADPEACLSRKKIKKTESGMYACDLCDKTFQKSSSLLRHKYEHTGKRPHQCQICKK
AFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREAAERE
AREKGHLEPTEMLLNRAYLQGIGPAGYPEHPEREPILRDALNGSIRERLQEVEGAFVKMS
RREHDFEEEEDESENKSTDGDTMRDEEENGEHSMDESSKSESKSDHEDAMEDGV
Download sequence
Identical sequences F1R6J7
ENSDARP00000084452 ENSDARP00000084452

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]