SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000102338 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000102338
Domain Number 1 Region: 788-855
Classification Level Classification E-value
Superfamily UBA-like 4.84e-16
Family UBA domain 0.00015
Further Details:      
 
Domain Number 2 Region: 1335-1427
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000000285
Family Canonical RBD 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000102338   Gene: ENSDARG00000078036   Transcript: ENSDART00000112423
Sequence length 1534
Comment pep:known_by_projection chromosome:Zv9:6:19170889:19196195:1 gene:ENSDARG00000078036 transcript:ENSDART00000112423 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MATGASPQGHYPISKASVNLSSSMVSNHGGPTRGWASEGKTDLSMGSRGQSSWGASNLNL
NPSANPAAWPALGHEGPAVGSGPSSMVCSNPLSLSMCGQGGVAPPHGTNGNGNIGCVNEN
LVGDCAWGNPDIPEQHQSPTNVSFNMKPPILKTDGPNNTNPEPMSPVNSWRGNLSQSPTE
PASKDGTAFWGSGNAKNGESKDSGWDSVGVSSWGQGGASRGSRGWGDWGKQPSTEGTEWD
ANEAPSQEHMSSWGPDTPASEGSRDSSEGHPRKRERSSSADLVPLLPKQDLDPRVLCNSG
WGQTPVRQHTVWEMEASTDKKNDVGTEDWGSSSNTASTGPPPPPPGCANSNISPPPRMDT
SKSEGHCRVMPNAGWGGSVPVSAQPNSGWGEPSANKKVSNGSGCNWGDPIPVAPNISGCN
GQSWASEEKSPSWNDCTSQKTTQNWGDGPKSSSGWGSSGCANSGEWGESSEMKNSSGSSS
WEPDSRNCKETQRGWTKASPAQSGCWGEAQHTNGSTQGWGGKLQESMCGNNGSGGIGSWG
GPNSVKQSNSGWSSRCRQETGDESTGWEEPSPSSVRRKMDIDDGTSTWGDPSAYSKSVNM
WDRNHSQNHPGTNNSGNGNNLSVPNSANHPQRQGPTQNHVSGSNNNASPSQGECPLNRIS
MVNPGWGEIPKVQPNTESSSWGETASSSSSVDNGTSAWGQSSRGRGGWSEGSRDSSGSYG
RGNAPAVSSPCQEGPKPMQDGWGSGGEEMGMNTSQWNADDGDMWNSPTSQDSTCNSWGHS
RKGPQRVKVSNKQDDVWIMNRLIKQLTDMGFPKDPAEEALKSNNMNLDQAMSALLEKKNE
LDKRGMGTSDYSNGLNKPMVCRPTNLSKDPSLDHSPFLDKDGRLSDDSSSSPFMPSPGLK
LPLASSSLPNQGLGGVSSGLSMQNLNNRQMHNGMFGTNGAAQTRVMQQQAPPPQPPVPPL
SSTQPNLRAQVPQLLTPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQVAY
QRLQIQQQMMQAQRNVSGPIKQQEQQVARTITNMQQQIQQHQRQLAQALLMKQQQPPPSS
HTGLHQNLGKASQDSFTAGLNPNMNVNCMEVGSLSLKDPPQPQSRLSQWTHPNSIDSLTA
STQHMEANLSKHGSISAAQSHVPAGKSSMEDSFSPYNMMSSSESPSNTLVSPESWTQGKS
PNEKIASGSNISWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPNGPTINTNIQDVNRYLL
RDRTGGKLLEMKSTWSPGPISHTQASLSQELWKVSPGTRNSSAPSRPPPGLTNTKPSSTW
GGNSLGLSQGWNNSYSSEGGTWSSDSPNRGSSWLVLRNLTPQIDGSTLRTLCMQHGPLIT
FHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFASEEDVNRFFAQGQSLTPT
TSWQASPAPGSSQPRLGNPTASHPTGLWSGGGGTKSVCSAGNSSSGNGGDMLWGGVPQYS
SLWAPPNGDDARVIGSPIPINTLLPGDLLSGESM
Download sequence
Identical sequences A0A0R4IVQ1
XP_021329763.1.45394 XP_021332752.1.45394 ENSDARP00000102338 ENSDARP00000102338

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]