SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000109289 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000109289
Domain Number 1 Region: 67-136
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 4.97e-18
Family HLH, helix-loop-helix DNA-binding domain 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000109289   Gene: ENSDARG00000007277   Transcript: ENSDART00000127664
Sequence length 237
Comment pep:known chromosome:Zv9:4:20676918:20680797:1 gene:ENSDARG00000007277 transcript:ENSDART00000127664 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDVFSTSQIFYDSTCASSPEDLEFGASGELTGSEEDEHVRAPGAPHQPGHCLQWACKACK
RKASTVDRRRAATMRERRRLKKVNHAFEALRRCTSANPSQRLPKVEILRNAIQYIESLQE
LLREQVENYYSLPMESSSEPASPSSSCSESMVDCNSPVWPQMNQNYGNSYNFDAQNASTM
ERTPAVSSLQCLSSIVDRLSSVDPAGMRNMVVLSPTGSDSQCSSPDSPNNRPVYHVL
Download sequence
Identical sequences Q5TZ22
ENSDARP00000098724 ENSDARP00000109289 7955.ENSDARP00000098724

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]