SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000113084 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000113084
Domain Number 1 Region: 117-180
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.000000000183
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.049
Further Details:      
 
Domain Number 2 Region: 29-80
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.00000497
Family HLH, helix-loop-helix DNA-binding domain 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000113084   Gene: ENSDARG00000052618   Transcript: ENSDART00000137704
Sequence length 573
Comment pep:known chromosome:Zv9:2:50703832:50768566:-1 gene:ENSDARG00000052618 transcript:ENSDART00000137704 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIPPGDCLYAGRKRRKPVQKQKPEKADQKSNPSKRHRDRLNAELDRLASLLPFSAEVITK
LDKLSVLRLSVSFLRVKSFFQAVQEKENHSADVSPTETRKEVQPCVVESDLLLQSLSGFA
LVVSSDGIIFYASSTIIDYLGFHQTDVMHQKVFDYIHVDERQEFRKQIHWAMNPGQQDTD
EDVVTAHLYSAEQPDGVSPELTPFLTRCFIARMRCLLDSTSGFLNMQFQGSLKFLQGQRR
RTLSGALLPPQLALFCVAVPLVLPSITELRMKSVTVKCKNRSSGCSEKRQRAPRGSYDSE
DELRYNWMSTFSQDASWAYSRKYRGDACKTQDEPLNSHVSTSVSSKLQTDDASWDARCPV
ALRTDSNENYQPGSFQKHNYSVKLRIGCNSHLQKYEVDDEKRYMMQNEAFNTLPEAAIKT
EQDSDSENGCNAYGMLWRPDYTQVKTEPEYYDYCSFYQKGKTTVSPYTNGHHKYLCAGVS
RPRKCVLYKDLNHSDVPIGNQDGYMFTNEHKNNMQRLAYEFRGHNRVHIIKQEPDDSPVW
CPEVIQGHVQHNIPANCTVSNVVLKGNPYVHMQ
Download sequence
Identical sequences B0S7S2
ENSDARP00000068999 ENSDARP00000113084 7955.ENSDARP00000068999 ENSDARP00000068999

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]