SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000114543 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000114543
Domain Number 1 Region: 230-331
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 6.12e-25
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.0000175
Further Details:      
 
Domain Number 2 Region: 85-186
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.00000000000000812
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.037
Further Details:      
 
Domain Number 3 Region: 4-73
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.0000000811
Family HLH, helix-loop-helix DNA-binding domain 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000114543   Gene: ENSDARG00000006181   Transcript: ENSDART00000147222
Sequence length 708
Comment pep:novel chromosome:Zv9:13:31993411:32007265:1 gene:ENSDARG00000006181 transcript:ENSDART00000147222 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RVSSERRKEKSRDAARCRRGKESEVFYELSRELPLPHSVTSNLDKASVMRLALSYLRLRK
LLNSDVLEKETALDTQWNGSFLKALDGFLLVLSADGDIVYLSENVSKCLGLPQIELTGHS
VFEFTHPCDHEELREMLAHRFGLSKKSKDQNTNRSFLLRMKCTLTSRGRTVNVKSASWKV
LRCSGRIHTADGVEKEVCEEKNTCSTYLVLICESIPHPANIEAPLDSRTFLSRHTLDMRF
TYCDERITELLGFDPEDVLQHSVYEYYHALDSDHMTKTHHSLFVKGQVCTGQYRLLAKAG
GFVWAETQATVIYNSKNSQAQCVVCVNYILSGIEQPKQILSLQQTNSTKIKQEEHQEEVE
VTMAELKEEEKEMDKEDEECVQPVVQHNSLKGETEALTVADPVLTLDINITDSAISVLTE
IPLYNDVMLPSSDVLLPLSPLSPPCSSLNDDEASTGHLQHDQFPFQQSSDSSRSQVDLPV
DSELCDQLKPDHVEKHFSMDIESKTQGVGLDLEMLAPYIPMDDDFQLRTVSPVRPMCSSP
CSGLDLTPSSSTQTSPALSAATPDSLSCDPVQQKNKTTVQDHSREIIQDSDISYKCQTNP
KLLKRKLETIPLSEAIRLGSVLQVVTDFPEKKVRKTDAPSSEGIRHATILLLPSNVASRL
LSRSSEGGAIAMPLPQITHHDCEVNAPVIGRQHLLQGEELLCALDLVI
Download sequence
Identical sequences F1QEA3
ENSDARP00000114543

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]