SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000120518 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000120518
Domain Number 1 Region: 78-253
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 3.92e-42
Family Ypt/Rab-GAP domain of gyp1p 0.01
Further Details:      
 
Domain Number 2 Region: 228-349
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 1.36e-30
Family Ypt/Rab-GAP domain of gyp1p 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000120518   Gene: ENSDARG00000060096   Transcript: ENSDART00000132036
Sequence length 478
Comment pep:novel chromosome:Zv9:10:7557850:7596243:1 gene:ENSDARG00000060096 transcript:ENSDART00000132036 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAKLHAGNGVHWKDGKSQRGTADGLAEQESSSRGSDSELNGFANTEVQPDKYGFIGGAQQ
TAGENDDIPPDVLRQREAKWLDMLNNWDKWMAKKHKKVKLRCQKGIPPSLRGRAWLYLSG
GKVKKEQNPGKFKELDSQPGDPKWLDVIEKDLHRQFPFHEMFVARGGHGQQDLFRVLKAY
TLHRPEEGYCQAQAPIAAVLLMHMPAEDAFWGLVQICEKYLPGYYSAGLEAIQLDGEILF
ALLKRVSPVAHRHLKKYKIDPILYMTEWFMCAFSRTLPWASVLRVWDMFFCEGVKIIFRV
GLVLLKCMLGSPEKLKACQGQYETMELLRSIEPRYMQEAFLVQEVIDLPVSERDIEKEHL
SQLRRWKETHGELHCKSPPRMQGAKAIMAAEPPSRKDLKQNPTIIVEAAESQTETGKKAK
KSKTEKRKETQSSLPPLNPYPLPSDNHLSPSGTQPLQKHGPLQASNQSLSSAEQDTYL
Download sequence
Identical sequences B8A5W2
7955.ENSDARP00000078788 ENSDARP00000120518

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]