SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000051824 from Danio rerio 76_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000051824
Domain Number 1 Region: 325-406
Classification Level Classification E-value
Superfamily HMG-box 3.01e-21
Family HMG-box 0.00000625
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000051824   Gene: ENSDARG00000007369   Transcript: ENSDART00000051825
Sequence length 550
Comment pep:known chromosome:Zv9:8:54387633:54508061:-1 gene:ENSDARG00000007369 transcript:ENSDART00000051825 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPQLNGGGGDELGANDEMISFKDEGEQEDKISENVSAERDLDDVKSSLVNESENNSSSSD
SEQTERRPQPRADLESYEKAREYFTEALRRQQDGCFFKSPHYPGYPFLMIPDLANPYLSN
GALSPSARTYLQMKWPLLDVPGSAALKDSQSPSPGHLSNKVPVVQHAHMHPLTPLITYSN
EFPPGTPPAHLSPEILDPKTGIPRTPHPAELSPYYPLSPGAVGQIPHPLGWLVPQQGQHM
YPITAGGFRHPYPALAMNASMSSLVSSRFSPHLVPHHPHGLHQTGIPHPAIVSPVIKQEP
NGELSPPVNTKSPGPNKKDEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQIL
GRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRDNKTDSTPEDFSM
RSKKPCVQYLPQEKMIDSPGSSHGSMLDSPATPSAALASPAAPAATHSEQAQPLSLTTKP
ERFPLLSKPPPSSSSSSSSSSSGLPTPPLLSRPLPFALLTPPSPFHQAALHSHHALFQSQ
PLSLVTKSSD
Download sequence
Identical sequences F1R336
ENSDARP00000051824 ENSDARP00000051824 NP_571371.2.45394 7955.ENSDARP00000051824

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]