SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1czfA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1czfA
Domain Number 1 Region: 45-355
Classification Level Classification E-value
Superfamily Pectin lyase-like 4.58e-109
Family Galacturonase 0.000000000341
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1czfA   PDB: 1czf   SUPERFAMILY: 1czfA
Sequence length 362
Comment (A:)
Sequence
MHSFASLLAYGLVAGATFASASPIEARDSCTFTTAAAAKAGKAKCSTITLNNIEVPAGTT
LDLTGLTSGTKVIFEGTTTFQYEEWAGPLISMSGEHITVTGASGHLINCDGARWWDGKGT
SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQANDITFTDVTINNADGDTQGGHNTD
AFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSVGDRSNNVVKN
VTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKP
TNGVTIQDVKLESVTGSVDSGATEIYLLCGSGSCSDWTWDDVKVTGGKKSTACKNFPSVA
SC
Download sequence
Identical sequences A0A2K4ZZL6 A2R5S4 P26214
1czf_A 1czf_B 5061.CADANGAP00011984 e_gw1_6.364.1 1czfA XP_001397067.1.80561 CADANGAP00011984

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]