SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1d5yA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1d5yA
Domain Number 1 Region: 120-288
Classification Level Classification E-value
Superfamily Probable bacterial effector-binding domain 4.58e-58
Family Rob transcription factor, C-terminal domain 0.0000000147
Further Details:      
 
Domain Number 2 Region: 55-106
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000616
Family AraC type transcriptional activator 0.0000697
Further Details:      
 
Domain Number 3 Region: 4-53
Classification Level Classification E-value
Superfamily Homeodomain-like 0.000000000142
Family AraC type transcriptional activator 0.00014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1d5yA   PDB: 1d5y
Sequence length 292
Comment (A:)
Sequence
qagiirdlliwleghldqplsldnvaakagyskwhlqrmfkdvtghaigayirarrlsks
avalrltarpildialqyrfdsqqtftrafkkqfaqtpalyrrspewsafgirpplrlge
ftmpehkfvtledtpligvtqsyscsleqisdfrhemryqfwhdflgnaptippvlygln
etrpsqdkddeqevfyttalaqdqadgyvltghpvmlqggeyvmftyeglgtgvqefilt
vygtcmpmlnltrrkgqdieryypaedakagdrpinlrcellipirrklaaa
Download sequence
Identical sequences 1d5y_A 1d5y_B 1d5y_C 1d5y_D 1d5yA

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