SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1h88C from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1h88C
Domain Number 1 Region: 55-151
Classification Level Classification E-value
Superfamily Homeodomain-like 1.09e-33
Family Myb/SANT domain 0.00047
Further Details:      
 
Domain Number 2 Region: 5-54
Classification Level Classification E-value
Superfamily Homeodomain-like 2.44e-28
Family Myb/SANT domain 0.0019
Further Details:      
 
Domain Number 3 Region: 110-157
Classification Level Classification E-value
Superfamily CATH 3.03e-25
Family CATH 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1h88C   PDB: 1h88
Sequence length 159
Comment (C:)
Sequence
mghlgktrwtreedeklkklveqngtddwkvianylpnrtdvqcqhrwqkvlnpelikgp
wtkeedqrviklvqkygpkrwsviakhlkgrigkqcrerwhnhlnpevkktswteeedri
iyqahkrlgnrwaeiakllpgrtdnaiknhwnstmrrkv
Download sequence
Identical sequences 1h88C 1h88_C 1h89_C

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