SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1jtdB from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1jtdB
Domain Number 1 Region: 5-247
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 1.98e-59
Family beta-lactamase inhibitor protein-II, BLIP-II 0.000000000992
Further Details:      
 
Domain Number 2 Region: 138-273
Classification Level Classification E-value
Superfamily CATH 7.01e-21
Family CATH 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1jtdB   PDB: 1jtd   SUPERFAMILY: 1jtdB
Sequence length 273
Comment (B:)
Sequence
vaatsvvawggnndwgeatvpaeaqsgvdaiaggyfhglalkggkvlgwganlngqltmp
aatqsgvdaiaagnyhslalkdgeviawggnedgqttvpaearsgvdaiaagawasyalk
dgkviawgddsdgqttvpaeaqsgvtaldggvytalavknggviawgdnyfgqttvpaea
qsgvddvaggifhslalkdgkviawgdnrykqttvptealsgvsaiasgewyslalkngk
viawgssrtapssvqsgvssieagpnaayalkg
Download sequence
Identical sequences 000002241|e1jtdB1|5.1.4.32|B:1-273 cath|current|1jtdB00/39-311 d1jtdb_ 1jtd_B 1jtdB

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]