SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1kbuA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1kbuA
Domain Number 1 Region: 138-345
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 1.01e-41
Family Lambda integrase-like, catalytic core 0.00000000264
Further Details:      
 
Domain Number 2 Region: 27-134
Classification Level Classification E-value
Superfamily lambda integrase-like, N-terminal domain 9e-30
Family lambda integrase-like, N-terminal domain 0.000000578
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1kbuA   PDB: 1kbu
Sequence length 349
Comment (A:)
Sequence
mhhhhhhsnlltvhqnlpalpvdatsdevrknlmdmfrdrqafsehtwkmllsvcrswaa
wcklnnrkwfpaepedvrdyllylqarglavktiqqhlgqlnmlhrrsglprpsdsnavs
lvmrrirkenvdagerakqalafertdfdqvrslmensdrcqdirnlaflgiayntllri
aeiarirvkdisrtdggrmlihigrtktlvstagvekalslgvtklverwisvsgvaddp
nnylfcrvrkngvaapsatsqlstralegifeathrliygakddsgqrylawsghsarvg
aardmaragvsipeimqaggwtnvnivmnyirnldsetgamvrlledgd
Download sequence
Identical sequences 1kbuA 1kbu_A 1kbu_B 1ma7_A 1ma7_B

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