SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1n3cA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1n3cA
Domain Number 1 Region: 128-314
Classification Level Classification E-value
Superfamily DNA-glycosylase 2.36e-47
Family DNA repair glycosylase, 2 C-terminal domains 0.0000000135
Further Details:      
 
Domain Number 2 Region: 5-127
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 1.21e-38
Family DNA repair glycosylase, N-terminal domain 0.000000197
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1n3cA   PDB: 1n3c
Sequence length 317
Comment (A:)
Sequence
gseghrtlastpalwasipcprselrldlvlpsgqsfrwreqspahwsgvladqvwtltq
teeqlhctvyrgdksqasrptpdeleavrkyfqldvtlaqlyhhwgsvdshfqevaqkfq
gvrllrqdpieclfsficssnnniaritgmverlcqafgprliqlddvtyhgfpslqala
gpeveahlrklglgyraryvsasaraileeqgglawlqqlressyeeahkalcilpgvgt
kvadciclmaldkpqavpvnvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwg
pyagwaqavlfsadlrq
Download sequence
Identical sequences 1n3c_A 1n3cA

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