SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1nytA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1nytA
Domain Number 1 Region: 102-266
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 1.93e-68
Family Aminoacid dehydrogenase-like, C-terminal domain 0.00000172
Further Details:      
 
Domain Number 2 Region: 4-101
Classification Level Classification E-value
Superfamily Aminoacid dehydrogenase-like, N-terminal domain 2.24e-51
Family Shikimate dehydrogenase-like 0.00016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1nytA   PDB: 1nyt
Sequence length 271
Comment (A:)
Sequence
metyavfgnpiahskspfihqqfaqqlniehpygrvlapindfintlnaffsaggkganv
tvpfkeeafaradelteraalagavntlmrledgrllgdntdgvgllsdlerlsfirpgl
rilligaggasrgvllpllsldcavtitnrtvsraeelaklfahtgsiqalsmdeleghe
fdliinatssgisgdipaipsslihpgiycydmfyqkgktpflawceqrgskrnadglgm
lvaqaahafllwhgvlpdvepvikqlqeels
Download sequence
Identical sequences 1nytA 1nyt_A 1nyt_B 1nyt_C 1nyt_D

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]