SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1q08A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1q08A
Domain Number 1 Region: 2-87
Classification Level Classification E-value
Superfamily Putative DNA-binding domain 2.12e-35
Family DNA-binding N-terminal domain of transcription activators 0.0000487
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1q08A   PDB: 1q08   SUPERFAMILY: 1q08A
Sequence length 99
Comment (A:)
Sequence
sdlqrlkfirharqlgfslesirellsiridpehhtcqeskgivqerlqeveariaelqs
mqrslqrlndaccgtahssvycsilealeqgasgvksgc
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Identical sequences cath|current|1q08A00/43-136 cath|current|1q08B00/45-133 cath|current|1q09A00/44-133 cath|current|1q0aA00/44-134 cath|current|1q0aB00/44-132 1q08A 1q08_A 1q08_B 1q09_A 1q0a_A 1q0a_B

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