SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1qdmA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1qdmA
Domain Number 1 Region: 1-281,385-475
Classification Level Classification E-value
Superfamily Acid proteases 1.4e-178
Family Pepsin-like 0.00000000823
Further Details:      
 
Domain Number 2 Region: 285-387
Classification Level Classification E-value
Superfamily Saposin 1.13e-29
Family Swaposin 0.00000417
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1qdmA   PDB: 1qdm
Sequence length 478
Comment (A:)
Sequence
vrialkkrpidrnsrvatglsggeeqpllsganplrseeegdivalknymnaqyfgeigv
gtppqkftvifdtgssnlwvpsakcyfsiacylhsrykagasstykkngkpaaiqygtgs
iagyfsedsvtvgdlvvkdqefieatkepgitflvakfdgilglgfkeisvgkavpvwyk
mieqglvsdpvfsfwlnrhvdegeggeiifggmdpkhyvgehtyvpvtqkgywqfdmgdv
lvggkstgfcaggcaaiadsgtsllagptaiiteinekigaagvvsqecktivsqygqqi
ldlllaetqpkkicsqvglctfdgtrgvsagirsvvddepvksnglradpmcsacemavv
wmqnqlaqnktqdlildyvnqlcnrlpspmgesavdcgslgsmpdieftiggkkfalkpe
eyilkvgegaaaqcisgftamdippprgplwilgdvfmgpyhtvfdygklrigfakaa
Download sequence
Identical sequences 1qdmA 1qdm_A 1qdm_B 1qdm_C

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