SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1retA from PDB chains (SCOP 1.75)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  1retA
Domain Number 1 Region: 1-41
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000657
Family Recombinase DNA-binding domain 0.00042
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1retA   PDB: 1ret   SUPERFAMILY: 1retA
Sequence length 43
Comment (A:)
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Identical sequences 1res_A 1ret_A 1retA 000002475|e1gdtA1||A:141-183 000045268|e1resA1||A:1-43 000045271|e1retA1||A:1-43 cath|current|1gdtA03/141-183 cath|current|1resA00/1-43 cath|current|1retA00/1-43 d1gdta1 d1gdtb1 d1resa_ d1reta_ d1zr2a1 d1zr2b1 d1zr4a1 d1zr4b1 d1zr4d1 d1zr4e1 d2gm4a1 d2gm4b1

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