SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1rrqA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1rrqA
Domain Number 1 Region: 13-231
Classification Level Classification E-value
Superfamily DNA-glycosylase 5.74e-76
Family Mismatch glycosylase 0.00000000629
Further Details:      
 
Domain Number 2 Region: 238-360
Classification Level Classification E-value
Superfamily Nudix 1.11e-27
Family MutY C-terminal domain-like 0.000000827
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1rrqA   PDB: 1rrq
Sequence length 369
Comment (A:)
Sequence
gshmtreterfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqqtrvetvipy
feqfidrfptlealadadedevlkaweglgyysrvrnlhaavkevktryggkvpddpdef
srlkgvgpytvgavlslaygvpepavngnvmrvlsrlflvtddiakcstrkrfeqivrei
mayenpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqv
plavavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgeqyglqvelt
epivsfehafshlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreyke
wasgvrppp
Download sequence
Identical sequences 1rrq_A 4ypr_A 4ypr_B 1rrqA

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