SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1tkbA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1tkbA
Domain Number 1 Region: 9-331
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 3.25e-214
Family TK-like PP module 0.00000126
Further Details:      
 
Domain Number 2 Region: 336-530
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 5.7e-114
Family TK-like Pyr module 0.00024
Further Details:      
 
Domain Number 3 Region: 542-666
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 1.46e-52
Family Transketolase C-terminal domain-like 0.00026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1tkbA   PDB: 1tkb
Sequence length 678
Comment (A:)
Sequence
qftdidklavstirilavdtvskansghpgaplgmapaahvlwsqmrmnptnpdwinrdr
fvlsnghavallysmlhltgydlsiedlkqfrqlgsrtpghpefelpgvevttgplgqgi
snavgmamaqanlaatynkpgftlsdnytyvflgdgclqegisseasslaghlklgnlia
iyddnkitidgatsisfdedvakryeaygwevlyvengnedlagiakaiaqaklskdkpt
likmtttigygslhagshsvhgaplkaddvkqlkskfgfnpdksfvvpqevydhyqktil
kpgveannkwnklfseyqkkfpelgaelarrlsgqlpanwesklptytakdsavatrkls
etvledvynqlpeliggsadltpsnltrwkealdfqppssgsgnysgryirygirehamg
aimngisafganykpyggtflnfvsyaagavrlsalsghpviwvathdsigvgedgpthq
pietlahfrslpniqvwrpadgnevsaayknsleskhtpsiialsrqnlpqlegssiesa
skggyvlqdvanpdiilvatgsevslsveaaktlaaknikarvvslpdfftfdkqpleyr
lsvlpdnvpimsvevlattcwgkyahqsfgidrfgasgkapevfkffgftpegvaeraqk
tiafykgdklisplkkaf
Download sequence
Identical sequences 1tka_A 1tka_B 1tkb_A 1tkb_B 1tkc_A 1tkc_B 1tkbA

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