SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1u78A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1u78A
Domain Number 1 Region: 55-104
Classification Level Classification E-value
Superfamily Homeodomain-like 8.21e-21
Family Recombinase DNA-binding domain 0.00019
Further Details:      
 
Domain Number 2 Region: 2-51
Classification Level Classification E-value
Superfamily Homeodomain-like 5.61e-18
Family Recombinase DNA-binding domain 0.000071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1u78A   PDB: 1u78
Sequence length 141
Comment (A:)
Sequence
mprgsalsdteraqldvmkllnvslhemsrkisrsrhcirvylkdpvsygtskraprrka
lsvrdernviraasnscktardirnelqlsaskrtilnvikrsgvivrqklrpapllsad
hklkrlefaknnmgthhhhhh
Download sequence
Identical sequences 1u78_A 1u78A

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