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Domain assignment for 2fmpA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  2fmpA
Domain Number 1 Region: 153-333
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 1.6e-66
Family DNA polymerase beta-like 0.0000000246
Further Details:      
 
Domain Number 2 Region: 4-87
Classification Level Classification E-value
Superfamily DNA polymerase beta, N-terminal domain-like 3.73e-33
Family DNA polymerase beta, N-terminal domain-like 0.0000148
Further Details:      
 
Domain Number 3 Region: 92-147
Classification Level Classification E-value
Superfamily PsbU/PolX domain-like 1.19e-16
Family DNA polymerase beta-like, second domain 0.0000934
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 2fmpA   PDB: 2fmp
Sequence length 335
Comment (A:)
Sequence
MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
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Identical sequences G1RQX7 G3SIQ7 H2QW35 P06746
gi|4505931|ref|NP_002681.1| ENSPTRP00000034604 1bpx_A 1bpy_A 1bpz_A 1mq2_A 1mq3_A 1tv9_A 1tva_A 1zjm_A 1zjn_A 1zqa_A 1zqb_A 1zqc_A 1zqd_A 1zqe_A 1zqf_A 1zqg_A 1zqh_A 1zqi_A 1zqj_A 1zqk_A 1zql_A 1zqm_A 1zqn_A 1zqo_A 1zqp_A 1zqq_A 1zqr_A 1zqs_A 1zqt_A 2fmp_A 2fmq_A 2fms_A 2i9g_A 2iso_A 2isp_A 2p66_A 2pxi_A 3c2k_A 3c2l_A 3c2m_A 3isb_A 3isc_A 3isd_A 3jpn_A 3jpo_A 3jpp_A 3jpq_A 3jpr_A 3jps_A 3jpt_A 3lk9_A 3mby_A 3rh4_A 3rje_A 3rjf_A 3rjg_A 3rjh_A 3rji_A 3rjj_A 3rjk_A 3tfr_A 3tfs_A 4do9_A 4doa_A 4dob_A 4doc_A 4kld_A 4kle_A 4klf_A 4klg_A 4klh_A 4kli_A 4klj_A 4kll_A 4klm_A 4klo_A 4klq_A 4kls_A 4klt_A 4klu_A 4lvs_A 4o9m_A 4rt2_A 4rt3_A 4uaw_A 4uay_A 4uaz_A 4ub1_A 4ub2_A 4ub3_A 4ub4_A 4ub5_A 4ubb_A 4ubc_A 4ymm_A 4ymn_A 4ymo_A 4yn4_A 5bol_A 5bom_A 5bpc_A 5db6_A 5db7_A 5db8_A 5db9_A 5dba_A 5dbb_A 5dbc_A 5eoz_A 5j0o_A 5j0p_A 5j0q_A 5j0r_A 5j0s_A 5j0t_A 5j0u_A 5j0w_A 5j0x_A 5j0y_A 5j29_A 5j2a_A 5j2b_A 5j2c_A 5j2d_A 5j2e_A 5j2f_A 5j2g_A 5j2h_A 5j2i_A 5j2j_A 5j2k_A 5tzv_A 5u8g_A 5u9h_A 5ugn_A 5ugo_A 5ugp_A 5v1f_A 5v1g_A 5v1h_A 5v1i_A 5v1j_A 5v1n_A 5v1o_A 5v1p_A 5v1r_A 5vez_A 5wnx_A 5wny_A 5wnz_A 5wo0_A 6cr4_A 6cr5_A 6cr6_A 6cr7_A 6cr8_A 6cr9_A 6crb_A 6crc_A 6g2q_A 7ice_A 7icf_A 7icg_A 7ich_A 7ici_A 7icj_A 7ick_A 7icl_A 7icm_A 7icn_A 7ico_A 7icp_A 7icq_A 7icr_A 7ics_A 7ict_A 7icu_A 7icv_A 8ica_A 8icb_A 8icc_A 8ice_A 8icf_A 8icg_A 8ich_A 8ici_A 8icj_A 8ick_A 8icl_A 8icm_A 8icn_A 8ico_A 8icp_A 8icq_A 8icr_A 8ics_A 8ict_A 8icu_A 8icv_A 8icw_A 8icx_A 8icy_A 8icz_A 9ica_A 9icb_A 9icc_A 9ice_A 9icf_A 9icg_A 9ich_A 9ici_A 9icj_A 9ick_A 9icl_A 9icm_A 9icn_A 9ico_A 9icp_A 9icq_A 9icr_A 9ics_A 9ict_A 9icu_A 9icv_A 9icw_A 9icx_A 9icy_A ENSP00000265421 ENSP00000265421 ENSP00000265421 9598.ENSPTRP00000034604 9606.ENSP00000265421 2fmpA ENSNLEP00000015641 NP_002681.1.87134 NP_002681.1.92137 XP_001143904.1.37143 XP_003269687.1.23891 XP_003823336.1.60992 XP_018887757.1.27298 ENSNLEP00000015641 ENSPTRP00000034604

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