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  Home > Genomes > PDB chains (SCOP 1.75) > 2gpfA

Domain assignment for 2gpfA from PDB chains (SCOP 1.75)

Domain architecture

Domain assignment details

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Strong hits

Sequence:  2gpfA
Domain Number 1 Region: 5-64
Classification Level Classification E-value
Superfamily MbtH-like 1.39e-44
Family MbtH-like 0.00023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 2gpfA   PDB: 2gpf
Sequence length 72
Comment (A:)
Sequence 
MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRP
LSLRQHMDKAAG
Download sequence
Identical sequences A0A071L463 A0A086BYN6 A0A0E1AY35 A0A0H2ZBG4 A0A0H3R5D8 A0A157WSH5 A0A1C7BW19 A0A1E9C501 A0A1F0IFV8 A0A1G5LYH8 A0A1S1BZM4 A6V572 Q9I169 V6AES8 W1MIR3
gi|218891608|ref|YP_002440475.1| 2gpfA 2gpf_A gi|15597608|ref|NP_251102.1| NYSGXRC-10231c NYSGXRC-T568 PaT86 gi|558666175|ref|YP_008802885.1| gi|514409725|ref|YP_008132950.1| 208963.PA14_33510 208964.PA2412 381754.PSPA7_2847 557722.PLES_28841 gi|478478790|ref|YP_007709441.1| gi|568154036|ref|YP_008943014.1| gi|392984038|ref|YP_006482625.1| gi|386058693|ref|YP_005975215.1| gi|152989747|ref|YP_001348207.1| gi|386066346|ref|YP_005981650.1| gi|568309645|ref|YP_008981914.1| NP_251102.1.87394 WP_003089636.1.100071 WP_003089636.1.100100 WP_003089636.1.100179 WP_003089636.1.100278 WP_003089636.1.100319 WP_003089636.1.100394 WP_003089636.1.100420 WP_003089636.1.100456 WP_003089636.1.100469 WP_003089636.1.100473 WP_003089636.1.100476 WP_003089636.1.100523 WP_003089636.1.100654 WP_003089636.1.100723 WP_003089636.1.100742 WP_003089636.1.100777 WP_003089636.1.100786 WP_003089636.1.100808 WP_003089636.1.100809 WP_003089636.1.100810 WP_003089636.1.100872 WP_003089636.1.100983 WP_003089636.1.100995 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WP_003089636.1.98410 WP_003089636.1.98414 WP_003089636.1.98433 WP_003089636.1.9845 WP_003089636.1.985 WP_003089636.1.98515 WP_003089636.1.98522 WP_003089636.1.98573 WP_003089636.1.98600 WP_003089636.1.98610 WP_003089636.1.98672 WP_003089636.1.98678 WP_003089636.1.98693 WP_003089636.1.98718 WP_003089636.1.98788 WP_003089636.1.98814 WP_003089636.1.9885 WP_003089636.1.98873 WP_003089636.1.98907 WP_003089636.1.98926 WP_003089636.1.98958 WP_003089636.1.98960 WP_003089636.1.98963 WP_003089636.1.99065 WP_003089636.1.99068 WP_003089636.1.99103 WP_003089636.1.99214 WP_003089636.1.99293 WP_003089636.1.99353 WP_003089636.1.99378 WP_003089636.1.99386 WP_003089636.1.99389 WP_003089636.1.99443 WP_003089636.1.99461 WP_003089636.1.9951 WP_003089636.1.99516 WP_003089636.1.99647 WP_003089636.1.99654 WP_003089636.1.99662 WP_003089636.1.99746 WP_003089636.1.99757 WP_003089636.1.99772 WP_003089636.1.99795 WP_003089636.1.99835 WP_003089636.1.9989 WP_003089636.1.99930 gi|564952506|ref|YP_008885076.1| gi|558672526|ref|YP_008809234.1| 001175478|e2gpfA2|4076.2.1.1|A:1-72 d2gpfa1 gi|116050352|ref|YP_790831.1|

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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