SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 3brdA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3brdA
Domain Number 1 Region: 198-355
Classification Level Classification E-value
Superfamily DNA-binding protein LAG-1 (CSL) 1.76e-109
Family DNA-binding protein LAG-1 (CSL) 0.0000529
Further Details:      
 
Domain Number 2 Region: 10-194
Classification Level Classification E-value
Superfamily p53-like transcription factors 3.24e-71
Family DNA-binding protein LAG-1 (CSL) 0.00000000542
Further Details:      
 
Domain Number 3 Region: 356-473
Classification Level Classification E-value
Superfamily E set domains 3.52e-37
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.0000174
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 3brdA   PDB: 3brd
Sequence length 477
Comment (A:)
Sequence
gplgsgdsvqsltsdrmidflsnkekyecvisifhakvaqksygnekrffcpppciylig
qgwklkkdrvaqlyktlkasaqkdaaiendpiheqqatelvayigigsdtserqqldfst
gkvrhpgdqrqdpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikvi
skpskkkqsmkntdckylciasgtkvalfnrlrsqtvstrylhvegnafhasstkwgaft
ihlfdderglqetdnfavrdgfvyygsvvklvdsvtgialprlrirkvdkqqvildascs
eepvsqlhkcafqmidnelvylclshdkiiqhqatainehrhqindgaawtiistdkaey
rffeamgqvanpispcpvvgslevdghgeasrvelhgrdfkpnlkvwfgatpvettfrse
eslhcsippvsqvrneqthwmftnrttgdvevpislvrddgvvyssgltfsyksler
Download sequence
Identical sequences 1ttu_A 2fo1_A 3brd_A 3brdA

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