SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1cdgA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1cdgA
Domain Number 1 Region: 11-404
Classification Level Classification E-value
Superfamily (Trans)glycosidases 2.37e-108
Family Amylase, catalytic domain 0.000000381
Further Details:      
 
Domain Number 2 Region: 583-685
Classification Level Classification E-value
Superfamily Starch-binding domain-like 7e-35
Family Starch-binding domain 0.000000868
Further Details:      
 
Domain Number 3 Region: 407-492
Classification Level Classification E-value
Superfamily Glycosyl hydrolase domain 5.12e-29
Family alpha-Amylases, C-terminal beta-sheet domain 0.002
Further Details:      
 
Domain Number 4 Region: 498-577
Classification Level Classification E-value
Superfamily E set domains 4.4e-19
Family E-set domains of sugar-utilizing enzymes 0.00061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1cdgA   PDB: 1cdg
Sequence length 686
Comment (A:)
Sequence
apdtsvsnkqnfstdviyqiftdrfsdgnpannptgaafdgtctnlrlycggdwqgiink
indgyltgmgvtaiwisqpveniysiinysgvnntayhgywardfkktnpaygtiadfqn
liaaahaknikviidfapnhtspassdqpsfaengrlydngtllggytndtqnlfhhngg
tdfsttengiyknlydladlnhnnstvdvylkdaikmwldlgidgirmdavkhmpfgwqk
sfmaavnnykpvftfgewflgvnevspenhkfanesgmslldfrfaqkvrqvfrdntdnm
yglkamlegsaadyaqvddqvtfidnhdmerfhasnanrrkleqalaftltsrgvpaiyy
gteqymsggtdpdnraripsfststtayqviqklaplrkcnpaiaygstqerwinndvli
yerkfgsnvavvavnrnlnapasisglvtslpqgsyndvlggllngntlsvgsggaasnf
tlaaggtavwqytaatatptighvgpmmakpgvtitidgrgfgsskgtvyfgttavsgad
itswedtqikvkipavaggnynikvanaagtasnvydnfevlsgdqvsvrfvvnnattal
gqnvyltgsvselgnwdpakaigpmynqvvyqypnwyydvsvpagktiefkflkkqgstv
tweggsnhtftapssgtatinvnwqp
Download sequence
Identical sequences 1cdgA 1cdg_A 1cxe_A 1cxh_A 1cxi_A 2cxg_A

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