SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1d3cA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1d3cA
Domain Number 1 Region: 11-404
Classification Level Classification E-value
Superfamily (Trans)glycosidases 3.71e-105
Family Amylase, catalytic domain 0.00000031
Further Details:      
 
Domain Number 2 Region: 583-685
Classification Level Classification E-value
Superfamily Starch-binding domain-like 7e-35
Family Starch-binding domain 0.000000868
Further Details:      
 
Domain Number 3 Region: 407-492
Classification Level Classification E-value
Superfamily Glycosyl hydrolase domain 5.12e-29
Family alpha-Amylases, C-terminal beta-sheet domain 0.002
Further Details:      
 
Domain Number 4 Region: 498-577
Classification Level Classification E-value
Superfamily E set domains 4.4e-19
Family E-set domains of sugar-utilizing enzymes 0.00061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1d3cA   PDB: 1d3c
Sequence length 686
Comment (A:)
Sequence
apdtsvsnkqnfstdviyqiftdrfsdgnpannptgaafdgtctnlrlycggdwqgiink
indgyltgmgvtaiwisqpveniysiinysgvnntayhgywardfkktnpaygtiadfqn
liaaahaknikviidfapnhtspassdqpsfaengrlydngtllggytndtqnlfhhngg
tdfsttengiyknlydladlnhnnstvdvylkdaikmwldlgidgirmnavkhmpfgwqk
sfmaavnnykpvftfgqwflgvnevspenhkfanesgmslldfrfaqkvrqvfrdntdnm
yglkamlegsaadyaqvddqvtfidnhdmerfhasnanrrkleqalaftltsrgvpaiyy
gteqymsggtdpdnraripsfststtayqviqklaplrkcnpaiaygstqerwinndvli
yerkfgsnvavvavnrnlnapasisglvtslpqgsyndvlggllngntlsvgsggaasnf
tlaaggtavwqytaatatptighvgpmmakpgvtitidgrgfgsskgtvyfgttavsgad
itswedtqikvkipavaggnynikvanaagtasnvydnfevlsgdqvsvrfvvnnattal
gqnvyltgsvselgnwdpakaigpmynqvvyqypnwyydvsvpagktiefkflkkqgstv
tweggsnhtftapssgtatinvnwqp
Download sequence
Identical sequences 1cxf_A 1cxk_A 1d3c_A 1d3cA

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