SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 2c8mA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  2c8mA
Domain Number 1 Region: 9-255
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 3.59e-70
Family LplA-like 0.00000000591
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 2c8mA   PDB: 2c8m
Sequence length 262
Comment (A:)
Sequence
MEGRLLLLETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLD
YMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLD
ARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP
DEKFRDKIAKSTRERVANVTDFVDVSIDEVRNALIRGFSETLHIDFREDTITEKEESLAR
ELFDKKYSTEEWNMGLLRKEVV
Download sequence
Identical sequences Q9HKT1
273075.Ta0514 cath|current|2artA00/1-257 cath|current|2aruA00/1-257 cath|current|2c7iA00/1-258 cath|current|2c7iB00/1-256 cath|current|2c7iC00/1-256 cath|current|2c7iD00/1-257 cath|current|2c8mA00/1-256 cath|current|2c8mB00/1-257 cath|current|2c8mC00/1-257 cath|current|2c8mD00/1-255 d3r07a1 2c8mA gi|16081626|ref|NP_393990.1| WP_010900939.1.49201 APC6457 TaT71 2ars_A 2art_A 2aru_A 2c7i_A 2c7i_B 2c7i_C 2c7i_D 2c8m_A 2c8m_B 2c8m_C 2c8m_D

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]