SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 2o4jA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  2o4jA
Domain Number 1 Region: 9-256
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.53e-88
Family Nuclear receptor ligand-binding domain 0.0000000013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 2o4jA   PDB: 2o4j
Sequence length 292
Comment (A:)
Sequence
lkdslrpklseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldlsplsm
lphladlvsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmddmsw
dcgsqdykydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspdrpgv
qdaklveaiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsf
qpensmkltplvlevfgneislvprgsmaisdpnsssvdklaaalehhhhhh
Download sequence
Identical sequences 2o4jA 1rjk_A 1rk3_A 1rkg_A 1rkh_A 2o4j_A 2o4r_A

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]