SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000056543 from Danio rerio 69_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000056543
Domain Number 1 Region: 286-373
Classification Level Classification E-value
Superfamily HMG-box 1.57e-25
Family HMG-box 0.00043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000056543   Gene: ENSDARG00000002031   Transcript: ENSDART00000056544
Sequence length 685
Comment pep:novel chromosome:Zv9:2:37770447:37783417:-1 gene:ENSDARG00000002031 transcript:ENSDART00000056544 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDLNFYTELSDGTGQHVDSEFMDNSSYNGYDSVNKFAGGSDSYLTTSGPGHHFLEKTFYT
PCLGDEEFEIPISLDPDSALTIEDVEAHFGELAEQAESSRGAGVGSVLASNTVVGGNDPS
FASTFMNPSSQGMEHLTLGVMNQQGGSALLSSTLGVDLGHSVGSHFASSSSMTIDVPINE
MSHSLLGHNQLTTIDHSDLSAQLGLSLGGGSVSKSPDQPLSTTPSPSGSLQDEDMEDFRQ
KTMLVDSFAVSEPSPAQISVPPPVVRRVGGKPSMVPVATVDTGASLGVKKGKKKKDPNEP
QKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKDY
LKALAAYRASQLSKSSSELEDSAPATPPSMPSPAPIHTPPAAPIRPRLTPITEQNTITNI
CASNIILDLPQVTTRSRTGSLPVAIGQAPAPSPAPTPTVTKIIISKQMLQGGAQLHQIPT
SMVTVIPAGVRAVQPGRQPPPLQQMQGTPPPPRLQQMVQTQAPPPLQAKPRGGAGSSVGI
TVTPPPPLQIKIVPASIHSDLSTPIIVTTAASATPVISASSISAADDPAPVEVQVEEPRE
ELHTGTDEAVTEEPEEMEMEVSVAPAASSSTASANLCVRAGCTNPAVESRDWDKEYCSNE
CVATHCRDVFMAWCSIKNQTSAAVK
Download sequence
Identical sequences F1QXS5
XP_001921001.2.45394 XP_021326932.1.45394 ENSDARP00000056543 ENSDARP00000056543

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]