SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDARP00000114249 from Danio rerio 69_9

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDARP00000114249
Domain Number 1 Region: 264-345
Classification Level Classification E-value
Superfamily HMG-box 1.44e-21
Family HMG-box 0.00000477
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDARP00000114249   Gene: ENSDARG00000031894   Transcript: ENSDART00000132405
Sequence length 365
Comment pep:known chromosome:Zv9:1:50321544:50410570:1 gene:ENSDARG00000031894 transcript:ENSDART00000132405 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPQLSGGGGGGDPELCATDEMIPFKDEGDPHKEQIFAEISHSEEEGDLAEIKSSLVNETE
ISPNSNSHDAARQSQITPDSYHEKHRDHPDDGKLQDLYSKGHPYPSYPGYIMMTNMNNEP
YMNNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDVNPKQAG
MPRHHPGPDIPNFYPLSPGGVGQMTPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKQE
HDTDLMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILG
RRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKIQEPASGTGQRM
KTAYI
Download sequence
Identical sequences Q9W7C0
ENSDARP00000114249 NP_571501.1.45394 7955.ENSDARP00000047875 ENSDARP00000114249

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]