The results are sorted from lowest E-value to highest E-value. Strong classifications have a low E-value. Weak classifications have an E-value greater than 0.0001. Weak hits are shown in gray. Weak hits are not shown on the domain architecture.
The family level classification is conditional on the domain being a member of the specified superfamily. There is a possibility that the selected domain is a member of a sub-family for which no structure has yet been solved.
| Sequence: |
FBpp0071085 |
| Domain Number 1 |
Region: 6-90 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Nucleic acid-binding proteins |
0.00000377 |
| Family |
Single strand DNA-binding domain, SSB |
0.043 |
| Further Details: |
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The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by 
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Information Content (IC) is an information theoretic score measured in bits of how informative it is to assign a given ontological term to a domain archtecture. The higher the score the more informative it is to talk about the term given the domain architecture.
H-score (hypergeometric score) indicates the strength of assigning an ontological term to this domain architecture. Assignments with higher scores are of a better quality. Details for the methodology be found on the dcGO website.
| Biological Process |
IC (bits) |
H-Score |
| Cellular Component |
IC (bits) |
H-Score |
| Molecular Function |
IC (bits) |
H-Score |
| External link(s) |
Protein: FBpp0071085 Gene: FBgn0029977 Transcript: FBtr0071133 |
| Sequence length |
486 |
| Comment |
type=protein; loc=X:complement(7812550..7812937,7813041..7813197,7813249..7814164); ID=FBpp0071085; name=hdm-PA; parent=FBgn0029977,FBtr0071133; dbxref=FlyBase:FBpp0071085,FlyBase_Annotation_IDs:CG15329-PA,GB_protein:AAF46293.1,REFSEQ:NP_572422,GB_protein:AAF46293,FlyMine:FBpp0071085,modMine:FBpp0071085; MD5=c2382bcdc837c74f09c03295242f5305; length=486; release=r5.30; species=Dmel; |
| Sequence |
MARRIKFQRLAEMRPTMTRFSTVALIVSKSSPNIFYDKMSGTERGVLSLTIRDSPNHLTN
CKCWGQRDCVDEYAAMLQIGHVVDIVGAKVMSIPFAAPGEQRYQPQATVSCALVVNEGSG
YVVRHDNDDFGQITILQQLLHQPIRPLGAVLKLADVRSGLGFPDKIITTNVNLLVVVAAV
RPVRQIKRKLQGPLSEVQELLQCLEVIVIDASYPEGMLLSVWQPDWIQRAQQWQPRRTVL
HLIDVRVSYSNFHRSLVLSHSNCTLICENPQAAGDDCRLLLAFAATVPLTTFSGCDQAEL
DNMPAVASIQAQMTVRQIYSRAEGELQDPSIHQFTAVLYGMVTKFDLDGLTSHVNRKCIA
CQQHIPRNLQDCASDACQQYFSLDNDEPRSISYFNINIHLSDQTGTLVEARLAGHPAERI
LGLRAEDFERLAEREKSELKWRFLLKYFEVRLMIKKPVGVRNHLVIVVVDMQAIPLEKLV
ANMVVF
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| Download sequence |
 |
| Identical sequences |
Q9W3M9
FBpp0071085 7227.FBpp0071085 FBpp0071085 FBpp0071085 NP_572422.1.81976 |
