The results are sorted from lowest E-value to highest E-value. Strong classifications have a low E-value. Weak classifications have an E-value greater than 0.0001. Weak hits are shown in gray. Weak hits are not shown on the domain architecture.
The family level classification is conditional on the domain being a member of the specified superfamily. There is a possibility that the selected domain is a member of a sub-family for which no structure has yet been solved.
| Sequence: |
FBpp0072388 |
| Domain Number 1 |
Region: 520-954 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Nucleic acid-binding proteins |
4.74e-115 |
| Family |
RNB domain-like |
0.000000734 |
| Further Details: |
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| |
| Sequence: |
FBpp0072388 |
| Domain Number - |
Region: 422-531 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Nucleic acid-binding proteins |
0.00115 |
| Family |
Cold shock DNA-binding domain-like |
0.025 |
| Further Details: |
|
| |
The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by 
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Information Content (IC) is an information theoretic score measured in bits of how informative it is to assign a given ontological term to a domain archtecture. The higher the score the more informative it is to talk about the term given the domain architecture.
H-score (hypergeometric score) indicates the strength of assigning an ontological term to this domain architecture. Assignments with higher scores are of a better quality. Details for the methodology be found on the dcGO website.
| Cellular Component |
IC (bits) |
H-Score |
| Biological Process |
IC (bits) |
H-Score |
| Molecular Function |
IC (bits) |
H-Score |
| External link(s) |
Protein: FBpp0072388 Gene: FBgn0035111 Transcript: FBtr0072486 |
| Sequence length |
1044 |
| Comment |
type=protein; loc=3L:join(212750..212784,212844..213976,214032..215451,215505..215624,215683..216109); ID=FBpp0072388; name=CG16940-PC; parent=FBgn0035111,FBtr0072486; dbxref=FlyBase:FBpp0072388,FlyBase_Annotation_IDs:CG16940-PC,GB_protein:AAN11425.1,REFSEQ:NP_728490,GB_protein:AAN11425,FlyMine:FBpp0072388,modMine:FBpp0072388; MD5=cbac15537129d184dd399b55febf6957; length=1044; release=r5.30; species=Dmel; |
| Sequence |
MPYPLYPAHSQVMSETSSVNVDADRDCRRIEGLRQRSQRLAARLQQMQREMESNASSKDL
SANNAVIPLQPLMRWAEPRPHPNQSQPSARSNSRQAIPYGVPVSTPAPVAMQLPYHVAFA
SYQATMQIPCLQPLSHLHVVSSPSHRLIAKKKSKRALRNEVEALQDMVKHLSHLSPDVNA
YACQLIRKNEILSQLEWSQTRSEAHPQQVGYQGRHRHDSEVSATNNGSHVQQQPKLGRRQ
RNSKKNDGSGSNGTQSQKTELEAMRSYINKIVQRHVGMDHQLSEDLIFKGNFSDLEAHAQ
RLVAAGYGRIVEEEIRVNRKNNRQAFIIMSTDREALERDGIVLLPVARRYAFDGDKVRAF
VLNPGAQGSSKTAEPSSGEISGGKPSLSLADGEELSDDTESQGSESDTDNVVVISSDNCP
KAFVIAITKRTELRQIVGTISFTNPTKLCDDQLFYKFRPYDLRVPMVYVPKDACAAHIGN
KQQIDVSGLLYLAHILETDCNGHCIAELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQR
FIDIYSQPPPPISQEDLRQRKDLRKMCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHIS
DVSHFLIEDNELDNIVKERSTSIYLANEVIHMLPQSLCMRCSLLPGQDKFAFSVFWRMNG
KGVMLQKKPEFCRTVINSCSQFAYEHAQKIIDNPNERFTENDFPTILNGFNPDDIRNRVL
WLHDIASSIRKTRLDNGALTINNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLAN
QAVARFIHDSFPDIAVLRNHPPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNE
APNPVAMNACLSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDIL
VHRLLAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYM
RAVVIEIFQHMMNVVTLESGHVISINYKMQKVLVDTHGVPNYILIAERNLKQSPRKLQLL
SVVPICLIIWDQKLTGFLKMEEQI
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| Download sequence |
 |
| Identical sequences |
Q8IRJ7
FBpp0072388 FBpp0072388 7227.FBpp0072388 FBpp0072387 NP_728490.1.81976 |
