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Domain assignment for FBpp0078086 from Drosophila melanogaster FlyBase 5.12

Domain architecture


Domain assignment details

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Strong hits

Sequence:  FBpp0078086
Domain Number 1 Region: 3-146
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.8e-48
Family RNA polymerase subunit RBP8 0.00026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: FBpp0078086   Gene: FBgn0037121   Transcript: FBtr0078432
Sequence length 149
Comment type=protein; loc=3L:21722293..21722742; ID=FBpp0078086; name=Rpb8-PA; parent=FBgn0037121,FBtr0078432; dbxref=FlyBase:FBpp0078086,FlyBase_Annotation_IDs:CG11246-PA,GB_protein:AAF51770.1,REFSEQ:NP_649352,GB_protein:AAF51770,FlyMine:FBpp0078086,modMine:FBpp0078086; MD5=84766d081cc588f1ff20cd4af6e19533; length=149; release=r5.30; species=Dmel;
Sequence
MAGVLFEDIFNVKDMDPEGKKFDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLVL
ATTLREDGCPDSGEYNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNEASRLSAYVSFGGL
LMRLQGDANNLHGFEVDQHMYLLMKRLAF
Download sequence
Identical sequences A0A1W4UEQ1 B3NIY5 B4GRW5 B4IAU7 B4ITD0 B4QK93 Q2M0A5 Q9VNZ3
DS10_00009076 DS10_00011798 FBpp0203878 FBpp0134764 NP_649352.1.81976 XP_001353518.1.19638 XP_001973676.1.56816 XP_002021344.1.64850 XP_002040857.1.34323 XP_002086242.1.41174 XP_002095266.1.41174 XP_015014158.1.56816 XP_016032887.1.80810 XP_016937931.1.48971 XP_016940196.1.48971 XP_016959609.1.21709 XP_016990824.1.97277 XP_017001253.1.47939 XP_017016329.1.37106 XP_017042398.1.74164 XP_017042399.1.74164 XP_017072467.1.81094 XP_017109424.1.53830 XP_017123083.1.32376 XP_017137781.1.22881 XP_020799920.1.32911 FBpp0188964 FBpp0213391 FBpp0078086 7227.FBpp0078086 7237.FBpp0274479 7245.FBpp0264797 7245.FBpp0268041 7296484___KOG3400 FBpp0264797 FBpp0268041 FBpp0078086 FBpp0078086 FBpp0274479

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