SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for FBpp0088618 from Drosophila melanogaster FlyBase 5.12

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  FBpp0088618
Domain Number 1 Region: 630-976
Classification Level Classification E-value
Superfamily Cysteine proteinases 1.6e-107
Family Calpain large subunit, catalytic domain (domain II) 0.0000111
Further Details:      
 
Domain Number 2 Region: 573-600
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.0000353
Family Ran binding protein zinc finger-like 0.0044
Further Details:      
 
Weak hits

Sequence:  FBpp0088618
Domain Number - Region: 392-418
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.000107
Family Ran binding protein zinc finger-like 0.0052
Further Details:      
 
Domain Number - Region: 348-380
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.000602
Family Ran binding protein zinc finger-like 0.0044
Further Details:      
 
Domain Number - Region: 290-318
Classification Level Classification E-value
Superfamily Rubredoxin-like 0.0447
Family Rubredoxin 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: FBpp0088618   Gene: FBgn0003464   Transcript: FBtr0089676
Sequence length 1240
Comment type=protein; loc=X:join(21223974..21224692,21225121..21225440,21225507..21227095,21227168..21227674,21227734..21228000,21228072..21228214,21228284..21228461); ID=FBpp0088618; name=sol-PD; parent=FBgn0003464,FBtr0089676; dbxref=FlyBase:FBpp0088618,FlyBase_Annotation_IDs:CG1391-PD,GB_protein:AAS65411.1,REFSEQ:NP_996524,GB_protein:AAS65411,FlyMine:FBpp0088618,modMine:FBpp0088618; MD5=55e292c7b5b45d39fcd35a7ae2cc4014; length=1240; release=r5.30; species=Dmel;
Sequence
MKPLRQVVNLNLNLQQEPQQKSPANPQQLQRKTQREPAAVSMNPTQFTIPRNGVFIAVNE
WSEPMASSSSVSSSSNHHHHHHSNSNSNSSGNSNIINNNSSSSSGSNKLYENECVALAQQ
QLRAAAAQAAQAAATAVAIASSPSAKAMAEPAPTATMPIYAQVNKQHKLKKKQQIASESQ
TNNNTGSGEIADAVSESLTAGLGTSTDGSGEASESESQVEEHSIYAKVWKGPRKATESKI
MHDPGSSSRLSGAASAAAGTASAGAIAAAVGAAAASRHDNKTQLGNGSRSKMWICIKCSY
AYNRLWLQTCEMCEAKAEQQQQQLQLQQQQQQQQQHHHHHLQQQQAEAPRDEPWTCKKCT
LVNYSTAMACVVCGGSKLKSISSIEDMTLRKGEFWTCSHCTLKNSLHSPVCSACKSHRQP
QLSMAMEAVRERPDGQSYEEQDAAAVGGGGGSAHQSGANEVKAPTALNLPLTSVALPMPM
LQLPTSTAAGLRGSRSPSPRMQLLPSLQQQRNSSSSGAIPKRHSTGGSIVPRNISIAGLA
NYNLQQGQGVGSASVVSASGAGSGAGAVGASTSTKKWQCPACTYDNCAASVVCDICSSPR
GLASAVLGEALGRKSVRVALTPADIRQESKLMENLRQLEETEALTKWQNIIQYCRDNSEL
FVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEINCDGGAYPPWAVFRTPLPSDICQG
VLGNCWLLSALAVLAEREDLVKEVLVTKEICGQGAYQVRLCKDGKWTTVLVDDLLPCDKR
GHLVYSQAKRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPLQASSLP
MPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNMKVDEEEYQQKGLRPRHAYSVLDVKD
IQGHRLLKLRNPWGHYSWRGDWSDDSSLWTDDLRDALMPHGASEGVFWISFEDVLNYFDC
IDICKVRSGWNEVRLQGTLQPLCSISCVLLTVLEPTEAEFTLFQEGQRNSEKSQRSQLDL
CVVIFRTRSPAAPEIGRLVEHSKRQVRGFVGCHKMLERDIYLLVCLAFNHWHTGIEDPHQ
YPQCILAIHSSKRLLVEQISPSPHLLADAIISLTLTKGQRHEGREGMTAYYLTKGWAGLV
VMVENRHENKWIHVKCDCQESYNVVSTRGELKTVDSVPPLQRQVIIVLTQLEGSGGFSIA
HRLTHRLANSRGLHDWGPPGATHCPPIENVHGLHAPRLIT
Download sequence
Identical sequences FBpp0088618 FBpp0088618

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]