The results are sorted from lowest E-value to highest E-value. Strong classifications have a low E-value. Weak classifications have an E-value greater than 0.0001. Weak hits are shown in gray. Weak hits are not shown on the domain architecture.
The family level classification is conditional on the domain being a member of the specified superfamily. There is a possibility that the selected domain is a member of a sub-family for which no structure has yet been solved.
| Sequence: |
FBpp0082071 |
| Domain Number 1 |
Region: 246-452 |
| Classification Level |
Classification |
E-value |
| Superfamily |
DNA ligase/mRNA capping enzyme, catalytic domain |
3.36e-46 |
| Family |
ATP-dependent DNA ligase catalytic domain |
0.00022 |
| Further Details: |
|
| |
| Domain Number 2 |
Region: 462-604 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Nucleic acid-binding proteins |
2.06e-32 |
| Family |
DNA ligase/mRNA capping enzyme postcatalytic domain |
0.00028 |
| Further Details: |
|
| |
| Domain Number 3 |
Region: 36-227 |
| Classification Level |
Classification |
E-value |
| Superfamily |
ATP-dependent DNA ligase DNA-binding domain |
0.000000000902 |
| Family |
ATP-dependent DNA ligase DNA-binding domain |
0.03 |
| Further Details: |
|
| |
| Domain Number 4 |
Region: 715-802 |
| Classification Level |
Classification |
E-value |
| Superfamily |
BRCT domain |
0.0000442 |
| Family |
DNA-repair protein XRCC1 |
0.055 |
| Further Details: |
|
| |
The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by 
(show help)
Information Content (IC) is an information theoretic score measured in bits of how informative it is to assign a given ontological term to a domain archtecture. The higher the score the more informative it is to talk about the term given the domain architecture.
H-score (hypergeometric score) indicates the strength of assigning an ontological term to this domain architecture. Assignments with higher scores are of a better quality. Details for the methodology be found on the dcGO website.
| Cellular Component |
IC (bits) |
H-Score |
| Biological Process |
IC (bits) |
H-Score |
| Molecular Function |
IC (bits) |
H-Score |
| External link(s) |
Protein: FBpp0082071 Gene: FBgn0038035 Transcript: FBtr0082600 |
| Sequence length |
806 |
| Comment |
type=protein; loc=3R:complement(8224822..8224930,8224994..8226160,8226249..8227041,8227116..8227467); ID=FBpp0082071; name=lig3-PA; parent=FBgn0038035,FBtr0082600; dbxref=FlyBase:FBpp0082071,FlyBase_Annotation_IDs:CG17227-PA,GB_protein:AAF54801.2,GB_protein:AAF54801.3,REFSEQ:NP_650187,GB_protein:AAF54801,FlyMine:FBpp0082071,modMine:FBpp0082071; MD5=d5b3d50b6e0262856c8bfedee19980c9; length=806; release=r5.30; species=Dmel; |
| Sequence |
MLLSRLTWQARILTRLLCNKMASKGLHNEDNKLDTFRRICDEIAGESSYLKKAERLQRFF
EKGSSGKGFKGDTVLWVQFLIPAANQRVYNLQNKALIKLFSRIFNADQQQMHLDLEQDGD
VSETLRKHFAASKKLKPQKQSKLYLQEVEEMLLHLVERTKEDEQTDLLQKLCSKATDLDL
RTFIRLVKHDLRINARARHILDAFGPDAYPAYQSSRDLVAIVEQFATKENKNYASSPVKK
TKKTSSSAIQVMTPISPMLASPCKSVEDAFKKSPTGLYSEIKYDGERVQIHKQGNDFKFF
SRNLKPVVDHKIRALKKYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA
NAAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIQPIKSHVQLSESEFLKTTRELAAMT
ARVLHANLEGVVLKSPTSTYQPGKRNWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGG
TLSIFLMGCYDAFGRLWKTVTKVHSGLDDATNAEVHKSLIKLTERADANAIPSWLLCSKS
LVPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISVRFPRITRRRSDKSAKEANDLAHLE
DLFEASKSNVNVDLLLANCSKDETAMNNKTTPEKEKKLNGNQSNGSKKLKRSNTGSDDED
GAPVLSKRKESKAIRSLSPSQKGLKDFFKPSKEFKSVVKKEPKEDEGNIESTSSKPQLFE
GLVAHFAMEKDSSKLMQQFSQHGGCCTTEPQKADLVFYANTNEALDLEKLRTLYRRSCRH
LNVSWLQSCLDTQSRQPFPLHAVMMK
|
| Download sequence |
 |
| Identical sequences |
Q9VG84
FBpp0082071 FBpp0082071 7227.FBpp0082071 NP_650187.2.81976 FBpp0082071 |
