SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for FBpp0228135 from Drosophila virilis 1.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  FBpp0228135
Domain Number 1 Region: 466-533
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.00000000000000144
Family SAM (sterile alpha motif) domain 0.052
Further Details:      
 
Domain Number 2 Region: 387-457
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.000000000301
Family SAM (sterile alpha motif) domain 0.056
Further Details:      
 
Domain Number 3 Region: 553-628
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.000000262
Family SAM (sterile alpha motif) domain 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: FBpp0228135   Gene: FBgn0200939   Transcript: FBtr0229643
Sequence length 709
Comment type=protein; loc=scaffold_13049:join(17621637..17621855,17621916..17622928,17623197..17624094); ID=FBpp0228135; name=Dvir\GJ13718-PA; parent=FBgn0200939,FBtr0229643; dbxref=FlyBase:FBpp0228135,FlyBase_Annotation_IDs:GJ13718-PA,GB_protein:EDW70310,REFSEQ:XP_002047968,FlyMine:FBpp0228135; MD5=5520d71d22d2f0f815ea5c0cc061144c; length=709; release=r1.2; species=Dvir;
Sequence
MTATATEASKMLEAALQQMDGIISNSATAAVGQPQAQPGSATTASLTSFCERNLISATNV
LSTAKTLALALQQVGLAAPAPDPVTAAIISDWLETHIPRQDSDERMRRLQRDKEGLALQY
QMLAERVSEQADRIIELEGLLTDKSQQLCTKEEQLQRQMISRSALETQKLELMSALSELK
LHRTALECENELNATDCNMPYGSMGNINQKNFAPEGGLAPKTPPSALRHQIKPQFHSLPR
SHGGANKQVQRLQANNNNNNNHTLDVNANSSGKQRNVAFASNEQILIDDSVLSDSAVPPE
DAMSMYSSFRSQTQSTPSPKLRERSARGLRSILGKLRRSNSSNCELTALEQAEPDEFRRG
GSRATAGGRIEWSAQTPMFCDADKHYSSWNAQEVCNWLAHMGLGCYQDNCRKWLKADPSV
CFFTASPVDIERELHLKSVLHRKKIMLAIDDITKKEFDELTVKAAKLDVGWVLRWLDDIG
LPQYKDYFLQAKVDGRMLHRLTLEDLSQLHVSSCLHIASLRCGILCMRRMSWDGEGLIRR
STRMAEQSDEAKSPDKESVDLWTAHRVMEWLKTIDLSEYAPNLRGAGVHGALMLYEDRFN
ADLLADLLSIPPSKSLLRRHLAMHFKELVGRTIIHSKRDAEAAPGYLPLTITAKLKPPKR
SQFTLKRRKSSKGQNEVDWTDLVCPMNTVVPVLSTSETLKDNDGSLSST
Download sequence
Identical sequences B4LFJ2
XP_002047968.1.90633 7244.FBpp0228135 FBpp0228135

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]