SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for FBpp0193565 from Drosophila sechellia 1.3

(show help)
Strong hits

Sequence:	FBpp0193565
Domain Number 1	Region: 45-252
Classification Level	Classification	E-value
Superfamily	Ribosomal protein S5 domain 2-like	3.09e-46
Family	Ribonuclease PH domain 1-like	0.0000589
Further Details:

Domain Number 2	Region: 207-312
Classification Level	Classification	E-value
Superfamily	Ribonuclease PH domain 2-like	1.08e-23
Family	Ribonuclease PH domain 2-like	0.00013
Further Details:

Domain Number 3	Region: 314-387
Classification Level	Classification	E-value
Superfamily	Eukaryotic type KH-domain (KH-domain type I)	0.0000000365
Family	Eukaryotic type KH-domain (KH-domain type I)	0.0074
Further Details:

Domain Number 4	Region: 384-465
Classification Level	Classification	E-value
Superfamily	Nucleic acid-binding proteins	0.000000141
Family	Cold shock DNA-binding domain-like	0.006
Further Details:

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Biological Process	IC (bits)	H-Score

Molecular Function	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

External link(s)	Protein: FBpp0193565 Gene: FBgn0167029 Transcript: FBtr0195073
Sequence length	485
Comment	type=protein; loc=scaffold_4:complement(6032939..6033467,6033535..6034463); ID=FBpp0193565; name=Dsec\GM12088-PA; parent=FBgn0167029,FBtr0195073; dbxref=FlyBase:FBpp0193565,FlyBase_Annotation_IDs:GM12088-PA,GB_protein:EDW53632,REFSEQ:XP_002037473,FlyMine:FBpp0193565; MD5=ecb704e8bd44aa3cbb71a0647376ceff; length=485; release=r1.3; species=Dsec;
Sequence	MCEMRLREIFQDSTHDKMSRDNAVNEVRSNVIDKVWSSFPDTEPSLIAEQFNQTSRTIFR ELIFERGLRCDGRDYDQLRNISCQVDMYKPLHGSALFQRGQTQVFCTVSLDSQESAMKLD SLAALDSGGLKAKNFMLHYEFPPYATGEVGRIGPVGRRELGHGALAERSLLPTLPNDYPF TVRLTSEVLESNGSSSMASVCGGSLALMDAGVPVSAPAAGVAIGLVTKFENDDTKHLQDY RILTDILGIEDYMGDMDMKVAGTRKGFTAIQADLKIPGIPLKVVMESLQKATDAKSKILD IMSEAIREPRKYRKECWPVSETVTVEPQQRAQLIGPSGLHMKRIYLETGTSLTAVDETHF NAFAPSQAAMDEAKELIEGYMVKERVPDLEFGGIYTAKITELRDTGVMVILYPSMPPALL HNSQLDQRKIAHPSALNLEVGQEIQVKYFGRDPVSGFMRLSRKVLQGPGLGIPRSLNKSA GESGT
Download sequence
Identical sequences	B4I025 XP_002037473.1.34323 FBpp0193565

SEARCH