SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSEEUP00000003933 from Erinaceus europaeus 69

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSEEUP00000003933
Domain Number 1 Region: 747-849
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 7.07e-28
Family DEP domain 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSEEUP00000003933   Gene: ENSEEUG00000004303   Transcript: ENSEEUT00000004325
Sequence length 868
Comment pep:novel genescaffold:HEDGEHOG:GeneScaffold_4711:18955:70838:-1 gene:ENSEEUG00000004303 transcript:ENSEEUT00000004325 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDSFSDLSAKNLTMVVNMNKSLSTEAHGFNSTSDPPSMSITRLFPALLECFGIVLCGYIA
GRANVITSTQAKGLGNFVSRFALPALLFKNMVVLNFSNVDWSFLYSILIAKASVFFIVCV
LTLLVASPENRFSKAGLFPIFATQSNDFALGYPIVEALYQNTYPEYLQYIYLVAPVSLMM
LNPLGFIFCEIQKWKDTQNASQNKVKIVGLGLLRVLQNPIVFMVFIGIAFNFILDQKVPV
YMENFLDGLANSFSGAALFYLGLTMVGKIKKLKKSAFVVLILLITAKLLVLPLLCREMVE
LLDKGGSAVNHTSLSNYAFLYGVFPVAPGVAIFATQFNMEVEIITSGMVISTFVSAPIMY
VSAWLLTFPTMDPKPLAYAIQNVSFDISIISLVSLIWSLAILLLSKKYKQLPHMLTINLL
IAQSIVCAGMMIWNFVKEKNFVGQILVFVLLYSSLYGTYLWTGLLAISLFLLKKRERVQI
PVGIIIISGWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIITAVTLFCSIVVAGISL
MCMNRTTQAGSYEGFDQSQNHKATGSANTAFEENPEPSSEPGQSFASSIPETXXXXXXXX
XXXLCCPATEPVATMTSGPVALSFDKNDHCVSRCNSQSCMLAQEEERYLQSGDQQLTRHV
LLCLLLIIGLFANLSSCLWWLFNQEPGRLYVELQFFCAVFNFGQGFITFGIFGLDKHLII
LPFKRRLEFLWNNKDTAENRGSPVPEEIKMTCQQFIHYHRDLCIQNIVKERRCGAKTSAG
TFCGCDLVNWLIEVGLASDRGEAVIYGDRLVQGGVIQHITNEYEFRDEYLFYRFLQKSPE
QSPPTTNANTSPQERYKEIEHSSLSPKT
Download sequence
Identical sequences ENSEEUP00000003933 ENSEEUP00000003933

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]