SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSEEUP00000006762 from Erinaceus europaeus 69

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSEEUP00000006762
Domain Number 1 Region: 6-223
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 1.39e-43
Family Reprolysin-like 0.0057
Further Details:      
 
Domain Number 2 Region: 316-348
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000183
Family TSP-1 type 1 repeat 0.0013
Further Details:      
 
Domain Number 3 Region: 638-695
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000116
Family TSP-1 type 1 repeat 0.0043
Further Details:      
 
Domain Number 4 Region: 757-802
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000131
Family TSP-1 type 1 repeat 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSEEUP00000006762   Gene: ENSEEUG00000007381   Transcript: ENSEEUT00000007413
Sequence length 872
Comment pep:novel genescaffold:HEDGEHOG:GeneScaffold_8057:570:205618:-1 gene:ENSEEUG00000007381 transcript:ENSEEUT00000007413 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ATRLTELAVERPVVAGADMVLHEAETSQRLLLPTMNMVNNMFQHQSLGIKVNIQVTKLVL
LRQRPAALSIGHHGERSLESFCHWQNEEFGGARYLGNNQVPGGKDDTPPVDAAVFVTRTD
FCVHKDEPCDTVGIAYLGGVCSAKRKCVLAEDNGLNLAFTIAHELGHNLGMNHDDDHAPC
AGRSHIMSGEWVKGRNPSDLSWSSCSREDLENFLKSKTSACLLVTDPRSQRAVRLPHKLP
GMHYSASEQCQILFGTNATFCRNMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXW
CRAGECVSKTPLPEHVDGDWSPWGAWSMCSRTCGPGARFRQRKCDNPPXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPCELYCSPLGKESPL
LVADRVLDGTPCGPYETDLCVHGRCQKIGCDGIIGSAAKEDRCGVCSGDGKTCRVVKGDF
SHARGTALKDSSKRSINSDWKIELPGEFQIAGTTVRYVRRGLWEKISAKGPTKTPLHLMX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVAGPWGTCSATCEKGVQHREV
TCVYQLQNGSHVATRPLYCPGPRPAPVQNCEGQDCLSIWEASEWSQXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSTCGKGLQSRVVQCMHRVTGR
HGNECPALSKPEAYRQCHLEVCNDKINVNTITSPRLAALTYKCTRDQWTVYCRVIREKDL
CQDMRWYQRCCQTCRDFYATKMRQQLPPPPSS
Download sequence
Identical sequences ENSEEUP00000006762 ENSEEUP00000006762

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]