SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSEEUP00000003802 from Erinaceus europaeus 69

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSEEUP00000003802
Domain Number 1 Region: 68-138
Classification Level Classification E-value
Superfamily Immunoglobulin 4.62e-18
Family I set domains 0.021
Further Details:      
 
Domain Number 2 Region: 266-358
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000663
Family I set domains 0.012
Further Details:      
 
Domain Number 3 Region: 411-476
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000523
Family TSP-1 type 1 repeat 0.0035
Further Details:      
 
Domain Number 4 Region: 183-250
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000717
Family I set domains 0.02
Further Details:      
 
Domain Number 5 Region: 538-594
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000366
Family TSP-1 type 1 repeat 0.0055
Further Details:      
 
Weak hits

Sequence:  ENSEEUP00000003802
Domain Number - Region: 476-535
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000103
Family TSP-1 type 1 repeat 0.0083
Further Details:      
 
Domain Number - Region: 357-416
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.017
Family TSP-1 type 1 repeat 0.0082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSEEUP00000003802   Gene: ENSEEUG00000004172   Transcript: ENSEEUT00000004183
Sequence length 631
Comment pep:novel genescaffold:HEDGEHOG:GeneScaffold_7456:10010:189900:1 gene:ENSEEUG00000004172 transcript:ENSEEUT00000004183 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VAIPPHKHVSGFSSSLRTLSSGEAGGSPRRPHRKPTILRKISAAQQLSASEVVTHLGQTV
ALASGTLSVLLHCEASGNPRPTISWARNGEEVQFSDRILLQPDDSLQILAPVEADVGFYT
CNATNALGYDSVSIAVTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXVPEAEVTWFRNKSKLSSPLHLHEGSLLLANVSFSDQGLYSRRAANLHGELTENTQLL
ILDPPQVPVQLDDIKALLSATGLNLPSVLTSPLGTQLVLNPGNSALLGCPIRGHPTPNIT
WFHGGQPVATVTGLTHYILEAGQILQVANLSSDSQGEFSCLAQNEAGALRQKASIVIQDY
WWSVDRLATCSASLGNRGVHTPRLRCLLNSTEVHPIHCAGKVRPAVQSIACHRRTCFWMV
TSWSACTRSCGGGVQTRRVTCQKLKASGISTPVPNEMCTQLAKRPVDTQACNQQLCVEWA
FSSWGQCNGPCIGPRLAVQHRQVFCQTRDGLTLPSEQCSALPRPVSTQNCWSEVCSVHWR
VSLWTLCTATCGNYGFQSRRVECVNARTNKAVPEHLCSWGPRPANWQRCNITPCENMECR
DTTRYCEKVKQLKLCQLSQFKSRCCGTCGKA
Download sequence
Identical sequences ENSEEUP00000003802 ENSEEUP00000003802

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]