SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSEEUP00000006981 from Erinaceus europaeus 69

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSEEUP00000006981
Domain Number 1 Region: 183-540
Classification Level Classification E-value
Superfamily Sema domain 8.76e-133
Family Sema domain 0.000000001
Further Details:      
 
Domain Number 2 Region: 601-685
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000732
Family I set domains 0.055
Further Details:      
 
Domain Number 3 Region: 536-587
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000209
Family Plexin repeat 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSEEUP00000006981   Gene: ENSEEUG00000007634   Transcript: ENSEEUT00000007662
Sequence length 774
Comment pep:novel genescaffold:HEDGEHOG:GeneScaffold_8816:7675:29043:1 gene:ENSEEUG00000007634 transcript:ENSEEUT00000007662 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPVAALLLWASLLTGAWPVTPTQDYLPVTPRVRLSFKXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPWTQMQVVKGRGSRATDGSLRSTPTV
PRQDYIFYLEPEKLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQ
TAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQSPAVYARIGRIC
LNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFIQQTQDVRNPVIYAVFT
SSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPS
MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEV
LFLGTPXDDRELEELMLEEVPFWEEPAPVKTMTISSKRQQLYVASAVGVTHFSLHRCQAY
GAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRGFNSNANKNTVE
SVQYGVAGSAAFLECQPRSPQATVKWLFQRDLSDRRREIRAEDRFLRTEQGLLLRALQLG
DRGLYSCTATENNFKHVITRVQLHVLGQEAVHAALFPSPAVSAPPPPGAGPPTPPYQELA
QLLAQPEVGLIHQYCQGYWRHVPPSPREAPGAPRPPEPQDQKKPRSRRHHPPDT
Download sequence
Identical sequences ENSEEUP00000006981 ENSEEUP00000006981

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]