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Domain assignment for ENSEEUP00000012653 from Erinaceus europaeus 69

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSEEUP00000012653
Domain Number 1 Region: 43-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 3.98e-35
Family SCAN domain 0.0000473
Further Details:      
 
Domain Number 2 Region: 413-470
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.96e-26
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 3 Region: 469-526
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.87e-26
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 4 Region: 513-571
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.99e-22
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 5 Region: 357-414
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.79e-21
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 6 Region: 319-371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.49e-20
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 7 Region: 213-270
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000248
Family KRAB domain (Kruppel-associated box) 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSEEUP00000012653   Gene: ENSEEUG00000013894   Transcript: ENSEEUT00000013878
Sequence length 577
Comment pep:novel genescaffold:HEDGEHOG:GeneScaffold_8489:7272:21394:1 gene:ENSEEUG00000013894 transcript:ENSEEUT00000013878 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAEARKSLALAPLDQPPEDLVIVKVEEDQSWDQESTLHENDPPGQELFRLRFRKLCYQE
TLGPREALIQLRALCHQWLRPDLNTKEQILELLVLEQFLTILPEELQTLVKEHQLENGEE
VVTLLEDLEKQIDILGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXISTSQSSAPSQERSPRDQEMTATLLTAGFQTLEKIEDMAVSLIQEEWLLNSSQK
DLSRDNRPENLRSVFSLGGETRNENKEIASKQVTSTGIQPHGEAAVRCNGDVIRGLEQGE
SKDLLGRLERQRGNPTQERRHKCDECGKSFAQSSGLVRHWRIHTGEKPYQCNVCGKAFSY
RSALLSHQDIHNKVKRYHCKECGKAFSQNTGLILHQRIHTGEKPYQCNQCGKAFSQSAGL
ILHQRIHSGERPYECNECGKAFSHSSHLIGHQRIHTGEKPYECDECGKTFRRSSHLIGHQ
RSHTGEKPYKCNECGRAFSQKSGLIEHQRIHTGERPYKCKECGKAFNGNTGLIQHLRIHT
GEKPYQCNECGKAFIQRSSLIRHQRIHSGEKSESTGV
Download sequence
Identical sequences ENSEEUP00000012653 ENSEEUP00000012653

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