SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000000146 from Equus caballus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000000146
Domain Number 1 Region: 28-330
Classification Level Classification E-value
Superfamily L domain-like 2.95e-45
Family Ngr ectodomain-like 0.048
Further Details:      
 
Domain Number 2 Region: 338-686
Classification Level Classification E-value
Superfamily L domain-like 2.04e-43
Family Ngr ectodomain-like 0.018
Further Details:      
 
Domain Number 3 Region: 749-901
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 4.58e-32
Family Toll/Interleukin receptor TIR domain 0.00034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000000146   Gene: ENSECAG00000000197   Transcript: ENSECAT00000000204
Sequence length 904
Comment pep:known chromosome:EquCab2:27:24186771:24201595:-1 gene:ENSECAG00000000197 transcript:ENSECAT00000000204 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSQSLPYHVYSFLRLLPFWVLCASCNKCAVRHEVADCSHLKLTQIPDDLPANITVLNLTH
NQFRRLPPDNFTRYSQLTILDGGFNCISKLEPELCQKLPLLEILDLQHNELSQFSDKTFM
FCMNLTELHLRSNSIQKIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSN
NKIQALRRDELDFLGNSSLKKLELSSNQIKEFSPGCFQAIGKLFGLSLNSVQLGPSLTEK
LCLELSNTSIQNLSLSNTQLYRTSNTTFFGLKQTNLTMLDLSHNNLTVIGNDSFAWLPHL
EYFFLEYNNIEHLYVHSFYGLFNVRYLNLRRSFTKQSISLASLPKIDDFSFQWLKCLEYL
NMEDNNFPGIKSNMFTGLVKLKHLSLSNSFSSLRTLTNETFLSLAHSPLLTLNLTKNKIS
KLESGAFSWLGHLKILDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTSNSFALVP
SLQRLMLRRVALKNVDSFPPPFRPLHNLTILDLSNNNIANINDELLEGLEKLEVLDLQHN
NLARLWKHANPGGPVHFLKGLSHLHVLNLESNGFDEIPAEAFKNLFELKSINLGLNNLNI
LPPSVFDDQVSLKSLSLQKNLITSVEKNVFGPALKNLSSLDMSFNPFDCTCESIAWFVNW
INGTHTNISELSSHYLCNTPPQYHGFPVMLFDTSSCKDSAPFELLFMINTSFLLIFIFIV
LLIHFEGWRISFYWNVSVHRVLGFKEIDSQPEQFEYAAYIIHAYKDRDWVWEHFSPMEEQ
DQTLKFCLEERDFQAGVLELEAIINSIKRSRKIIFIITQHLLKDPLCKRFKVHHAVQQAI
EQNLDSIILIFLEEIPDYKLNHALCLRRGMFKSRCILNWPVQKERINAFHHKLQVALGSR
NSAH
Download sequence
Identical sequences F7CCY6
ENSECAP00000000146 ENSECAP00000000146 XP_005606311.1.31192 XP_008529020.1.77740 XP_008529021.1.77740 XP_008529022.1.77740 XP_014591984.1.31192 9796.ENSECAP00000000146

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]