SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000001137 from Equus caballus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000001137
Domain Number 1 Region: 579-658
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000000001
Family Canonical RBD 0.014
Further Details:      
 
Weak hits

Sequence:  ENSECAP00000001137
Domain Number - Region: 257-282
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000222
Family CCCH zinc finger 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000001137   Gene: ENSECAG00000000883   Transcript: ENSECAT00000001501
Sequence length 1042
Comment pep:known chromosome:EquCab2:14:31466202:31521680:-1 gene:ENSECAG00000000883 transcript:ENSECAT00000001501 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKNYLPP
LELVKPEPKPPVQEKEEIKEEVFQEPAEEERDGRKKKYPSPQKTRSESSERRTREKKRED
GKWRDYDRYYERSELYREKYDWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDPNRNVEHRE
RSKFKSERNDLESSYVPVSAPPPNSSEQYSSGAQSIPSTVTVIAPAHHSENTTESWSNYY
NNHSSSNSFGRNPPPKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPP
PGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL
PIPRPPITQSSLINNRDQPGTSAVPNLAPVGARLPPPLSQNLLYTVSERQPMYSREHGAA
ASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEPDGYNPEAPSITS
SGRSQYRQFFSRTQTQRPNLIGLTSGDMDANPRAANIVIQTEPPVPVSINSNITRVVLEP
DSRKRAMSGLEGPLTKKPWLGKQGNNNQSKPGFLRKNQYTNTKLEVKKIPQELNNITKLN
EHFSKFGTIVNIQVAFKGDPEAALIQYLTNEEARKAISSTEAVLNNRFIRVLWHRENNEQ
PALQSPTQLLLQQQQTLSHLSQQHHHLPQHLHQQQVLVAQSPPSTVHGGIQKMMSKPQTS
GTYVLNKVPVKHRLGHAGGNQSDAAHLLNQSSGAGEDCQMFSTPGHPKMIYSSSNLKTPS
KLCSGSKSHDVQEVLKKKQEAMKLQQDMRKKRQEVLEKQIECQKMLISKLEKNKNMKPEE
RANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKTKTEAQKELLDTELDLHKRLSSGED
TTELRKKLNQLQVEAARLGILPVGRGKTMSSQGRGRGRGRGGRGRGSLNHMVVDHRPKAL
TVGGFIEEEKDELLQHFSAANQGSKFKDRRLQISWHKAKVPSVSTETEEEEVKEEEPETS
DLFLHDDDDEDEDEYESRSWRR
Download sequence
Identical sequences F6TU51
9796.ENSECAP00000001137 ENSECAP00000001137 ENSECAP00000001137

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]