SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSECAP00000003205 from Equus caballus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSECAP00000003205
Domain Number 1 Region: 109-441
Classification Level Classification E-value
Superfamily ARM repeat 4.41e-30
Family Armadillo repeat 0.047
Further Details:      
 
Domain Number 2 Region: 550-678
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 0.00000000000562
Family Toll/Interleukin receptor TIR domain 0.008
Further Details:      
 
Domain Number 3 Region: 476-538
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.000000152
Family SAM (sterile alpha motif) domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSECAP00000003205   Gene: ENSECAG00000004020   Transcript: ENSECAT00000004618
Sequence length 717
Comment pep:known chromosome:EquCab2:11:42365400:42380912:1 gene:ENSECAG00000004020 transcript:ENSECAT00000004618 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVLTLLLSAYKLCRFFAMSGPRPGAERLAVPGQDGGGGAGLWWAAGGHGAGAEVQGALER
ALPDLQQALSALKQAGGARAVGAGLAEVFQLVEEAWLLPAVGREVAQGLCDAIRLDGGLD
LLLRLLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLAKEREPVELARSVAGI
LEHMFKHSEETCQRLVAAGGLDAVLYWCRRMDPALLRHCALALANCALHGGQAAQRRMVE
KRAAEWLFPLAFSKEDELLRLHACLAVAVLATNKEVEREVERSGTLALVEPLVASLDPGR
FARCLVDASDTSQGRGPDDLQRLVPLLDSSRLEAQCIGAFYLCAEAAIKSLQGKTKVFSD
IGAIQSLKRLVSYSTNGTTSALAKRALRLLGEEVPRPILSCVASWKEAEVQTWLQQIGFS
QYCQSFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELTELKTFASYATCDRSNL
ADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSDQQLLEDCGIRLGVHRARILSAAREMLH
SPLPCTGCKPGGDTPDVFISYRRNSGSQLASLLKVHLQLHGFNVFIDVEKLEAGKFEDKL
IQSVMGARNFVLVLSAGALDKCMQDHDCKDWVHKEIATALSCGKNIVPVIDGFEWPEPQA
LPEDIQAVLTFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSDTSLEGAAPMGPT
Download sequence
Identical sequences F6QWS4
XP_001504177.1.31192 ENSECAP00000003205 9796.ENSECAP00000003205 ENSECAP00000003205

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]